About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_032488-T1
LLU|FUN_032489-T1
LLU|FUN_032490-T1ZINC FINGER PROTEIN
LLU|FUN_032491-T1REST COREPRESSOR COREST PROTEIN-RELATED
LLU|FUN_032492-T1NISCHARIN RELATED
LLU|FUN_032493-T1MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S10
LLU|FUN_032494-T1
LLU|FUN_032495-T1
LLU|FUN_032496-T1FOS TRANSCRIPTION FACTOR-RELATED
LLU|FUN_032497-T1
LLU|FUN_032498-T1
LLU|FUN_032499-T1
LLU|FUN_032500-T1FOS TRANSCRIPTION FACTOR-RELATED
LLU|FUN_032501-T1
LLU|FUN_032502-T1
LLU|FUN_032503-T1FOS TRANSCRIPTION FACTOR-RELATED
LLU|FUN_032504-T1DNA-DIRECTED RNA POLYMERASE
LLU|FUN_032505-T1
LLU|FUN_032506-T1RIBOSOME BINDING PROTEIN-1
LLU|FUN_032507-T1ENOLASE-PHOSPHATASE E1
LLU|FUN_032508-T1KINESIN LIGHT CHAIN
LLU|FUN_032509-T1
LLU|FUN_032510-T1EUKARYOTIC TRANSLATION INITIATION FACTOR
LLU|FUN_032511-T1UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX ASSEMBLY FACTOR 2
LLU|FUN_032512-T1
LLU|FUN_032513-T1ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL
LLU|FUN_032514-T1RAD54-LIKE
LLU|FUN_032515-T1
LLU|FUN_032516-T1
LLU|FUN_032517-T1B9 DOMAIN-CONTAINING
LLU|FUN_032518-T1ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
LLU|FUN_032519-T1LEUCOKININ RECEPTOR-RELATED
LLU|FUN_032520-T1
LLU|FUN_032521-T1ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER
LLU|FUN_032522-T1
LLU|FUN_032523-T1
LLU|FUN_032524-T1
LLU|FUN_032525-T1DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED
LLU|FUN_032526-T1
LLU|FUN_032527-T1
LLU|FUN_032528-T1
LLU|FUN_032529-T1
LLU|FUN_032530-T1
LLU|FUN_032531-T1ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 60
LLU|FUN_032532-T1
LLU|FUN_032533-T1
LLU|FUN_032534-T1BETA-HEXOSAMINIDASE
LLU|FUN_032535-T1
LLU|FUN_032536-T1
LLU|FUN_032537-T1
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