About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_032286-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_032287-T1
LLU|FUN_032288-T1
LLU|FUN_032289-T1NEUROTRANSMITTER GATED ION CHANNEL
LLU|FUN_032290-T1INTERFERON REGULATORY FACTOR
LLU|FUN_032291-T1INTERFERON REGULATORY FACTOR
LLU|FUN_032292-T1-
LLU|FUN_032293-T1SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE
LLU|FUN_032294-T1
LLU|FUN_032295-T1
LLU|FUN_032296-T1
LLU|FUN_032297-T1
LLU|FUN_032298-T1
LLU|FUN_032299-T1
LLU|FUN_032300-T1NEUROTRANSMITTER GATED ION CHANNEL
LLU|FUN_032301-T1
LLU|FUN_032302-T1
LLU|FUN_032303-T1
LLU|FUN_032304-T1
LLU|FUN_032305-T1
LLU|FUN_032306-T1
LLU|FUN_032307-T1ZINC METALLOPROTEINASE-RELATED
LLU|FUN_032308-T1D-DOPACHROME DECARBOXYLASE
LLU|FUN_032309-T1
LLU|FUN_032310-T1
LLU|FUN_032311-T1
LLU|FUN_032312-T1NUCLEOREDOXIN
LLU|FUN_032313-T1THIOREDOXIN
LLU|FUN_032314-T1
LLU|FUN_032315-T1
LLU|FUN_032316-T1
LLU|FUN_032317-T1ANDROGLOBIN
LLU|FUN_032318-T1
LLU|FUN_032319-T1TRANSMEMBRANE PROTEIN
LLU|FUN_032320-T1
LLU|FUN_032321-T1ANDROGLOBIN
LLU|FUN_032322-T15'-NUCLEOTIDASE-RELATED
LLU|FUN_032323-T1
LLU|FUN_032324-T1
LLU|FUN_032325-T15'-NUCLEOTIDASE-RELATED
LLU|FUN_032326-T1O-ACYLTRANSFERASE
LLU|FUN_032327-T1O-ACYLTRANSFERASE
LLU|FUN_032328-T1HISTONE DEACETYLASE COMPLEX SUBUNIT SAP130
LLU|FUN_032329-T1
LLU|FUN_032330-T1
LLU|FUN_032331-T1IRE1-RELATED
LLU|FUN_032332-T1
LLU|FUN_032333-T1ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN
LLU|FUN_032334-T1
LLU|FUN_032335-T1
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