About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_032186-T1
LLU|FUN_032187-T1ATP-BINDING CASSETTE SUB-FAMILY B
LLU|FUN_032188-T1ABC TRANSPORTER B FAMILY
LLU|FUN_032189-T1
LLU|FUN_032190-T1
LLU|FUN_032191-T1
LLU|FUN_032192-T1
LLU|FUN_032193-T1ACETYL, PROPIONYL, PYRUVATE, AND GLUTACONYL CARBOXYLASE-RELATED
LLU|FUN_032194-T1DELTA ADAPTIN-RELATED
LLU|FUN_032195-T1TELOMERASE RNA COMPONENT INTERACTING RNASE
LLU|FUN_032196-T1TYROSINE-PROTEIN KINASE
LLU|FUN_032197-T1SCY1-RELATED S/T PROTEIN KINASE-LIKE
LLU|FUN_032198-T1
LLU|FUN_032199-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_032200-T1
LLU|FUN_032201-T1
LLU|FUN_032202-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_032203-T1
LLU|FUN_032204-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_032205-T1
LLU|FUN_032206-T1
LLU|FUN_032207-T1
LLU|FUN_032208-T1
LLU|FUN_032209-T1BLR2807 PROTEIN
LLU|FUN_032210-T1UPF0764 PROTEIN C16ORF89
LLU|FUN_032211-T1CHITINASE
LLU|FUN_032212-T1CHITINASE
LLU|FUN_032213-T1CHITINASE
LLU|FUN_032214-T1CHITINASE
LLU|FUN_032215-T1OPSIN
LLU|FUN_032216-T1
LLU|FUN_032217-T1
LLU|FUN_032218-T1
LLU|FUN_032219-T1CHITINASE
LLU|FUN_032220-T1
LLU|FUN_032221-T1SOLUTE CARRIER FAMILY 22 MEMBER
LLU|FUN_032222-T1CELL FATE DETERMINING PROTEIN MAB21-RELATED
LLU|FUN_032223-T1ALANINE RACEMASE
LLU|FUN_032224-T1PEPTIDOGLYCAN RECOGNITION PROTEIN
LLU|FUN_032225-T1ALANINE RACEMASE
LLU|FUN_032226-T1
LLU|FUN_032227-T1
LLU|FUN_032228-T1
LLU|FUN_032229-T1
LLU|FUN_032230-T1CENTROMERE PROTEIN E
LLU|FUN_032231-T1HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
LLU|FUN_032232-T1
LLU|FUN_032233-T1AT29763P-RELATED
LLU|FUN_032234-T1
LLU|FUN_032235-T1ORF PROTEIN-RELATED
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