About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_032136-T1
LLU|FUN_032137-T1CENTROSOMAL PROTEIN OF 89 KDA
LLU|FUN_032138-T1GLYCOSYLPHOSPHATIDYLINOSITOL ANCHOR ATTACHMENT 1 PROTEIN
LLU|FUN_032139-T1UNCHARACTERIZED
LLU|FUN_032140-T1
LLU|FUN_032141-T1
LLU|FUN_032142-T1
LLU|FUN_032143-T1
LLU|FUN_032144-T1
LLU|FUN_032145-T1
LLU|FUN_032146-T1LIPASE
LLU|FUN_032147-T1
LLU|FUN_032148-T1FTP DOMAIN-CONTAINING PROTEIN
LLU|FUN_032149-T1DNA LIGASE
LLU|FUN_032150-T12-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2
LLU|FUN_032151-T1ANKYRIN REPEAT PROTEIN
LLU|FUN_032152-T1TALIN ROD DOMAIN-CONTAINING PROTEIN 1
LLU|FUN_032153-T1TETRATRICOPEPTIDE REPEAT PROTEIN 23
LLU|FUN_032154-T1WD REPEAT-CONTAINING PROTEIN 61
LLU|FUN_032155-T1
LLU|FUN_032156-T1
LLU|FUN_032157-T1PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED
LLU|FUN_032158-T1
LLU|FUN_032159-T1
LLU|FUN_032160-T1SERINE/THREONINE-PROTEIN KINASE
LLU|FUN_032161-T1T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN
LLU|FUN_032162-T1
LLU|FUN_032163-T1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
LLU|FUN_032164-T1
LLU|FUN_032165-T1AGAP005574-PA
LLU|FUN_032166-T1ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL
LLU|FUN_032167-T1
LLU|FUN_032168-T1ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL
LLU|FUN_032169-T1
LLU|FUN_032170-T1
LLU|FUN_032171-T1
LLU|FUN_032172-T1GH3 DOMAIN-CONTAINING PROTEIN
LLU|FUN_032173-T1GH3 DOMAIN-CONTAINING PROTEIN
LLU|FUN_032174-T1
LLU|FUN_032175-T1ZINC FINGER PROTEIN
LLU|FUN_032176-T1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
LLU|FUN_032177-T1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
LLU|FUN_032178-T1
LLU|FUN_032179-T1ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL
LLU|FUN_032180-T1ABC TRANSPORTER B FAMILY
LLU|FUN_032181-T1
LLU|FUN_032182-T1
LLU|FUN_032183-T1
LLU|FUN_032184-T1
LLU|FUN_032185-T1ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL
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