About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_031828-T1ANKYRIN REPEAT PROTEIN
LLU|FUN_031829-T1CENTROSOMAL PROTEIN 2
LLU|FUN_031830-T1ACETYL-COA CARBOXYLASE, ISOFORM A
LLU|FUN_031831-T1
LLU|FUN_031832-T1
LLU|FUN_031833-T1
LLU|FUN_031834-T1
LLU|FUN_031835-T1
LLU|FUN_031836-T1
LLU|FUN_031837-T1TOLL-LIKE RECEPTOR
LLU|FUN_031838-T1APOPTOSIS-INDUCING FACTOR 1
LLU|FUN_031839-T1AT01821P-RELATED
LLU|FUN_031840-T12-HYDROXYACID DEHYDROGENASE-RELATED
LLU|FUN_031841-T12-HYDROXYACID DEHYDROGENASE-RELATED
LLU|FUN_031842-T1MYELIN PROTEOLIPID
LLU|FUN_031843-T1ALPHA-AMYLASE FAMILY MEMBER
LLU|FUN_031844-T1EPHRIN TYPE-B RECEPTOR
LLU|FUN_031845-T1EPHRIN TYPE-B RECEPTOR
LLU|FUN_031846-T1
LLU|FUN_031847-T1OVARIAN CARCINOMA IMMUNOREACTIVE ANTIGEN
LLU|FUN_031848-T1
LLU|FUN_031849-T1
LLU|FUN_031850-T1
LLU|FUN_031851-T1SCAVENGER RECEPTOR CLASS F
LLU|FUN_031852-T1SCAVENGER RECEPTOR CLASS F
LLU|FUN_031853-T1
LLU|FUN_031854-T1
LLU|FUN_031855-T1
LLU|FUN_031856-T1
LLU|FUN_031857-T1
LLU|FUN_031858-T1
LLU|FUN_031859-T1FORKHEAD BOX PROTEIN
LLU|FUN_031860-T1
LLU|FUN_031861-T1
LLU|FUN_031862-T1
LLU|FUN_031863-T1
LLU|FUN_031864-T1
LLU|FUN_031865-T1
LLU|FUN_031866-T1
LLU|FUN_031867-T1AMIDOPHOSPHORIBOSYLTRANSFERASE
LLU|FUN_031868-T1XAA-PRO AMINOPEPTIDASE 3
LLU|FUN_031869-T1HSC70-INTERACTING PROTEIN
LLU|FUN_031870-T1TRANSMEMBRANE GTPASE FZO
LLU|FUN_031871-T1
LLU|FUN_031872-T1LIPOXYGENASE
LLU|FUN_031873-T1PROTEIN INTURNED
LLU|FUN_031874-T1GEO05313P1
LLU|FUN_031875-T1
LLU|FUN_031876-T1CHLORIDE CHANNEL PROTEIN
LLU|FUN_031877-T1THROMBOSPONDIN TYPE I DOMAIN-CONTAINING 1
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