About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_031626-T1LD39211P
LLU|FUN_031627-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 89
LLU|FUN_031628-T1ATP SYNTHASE
LLU|FUN_031629-T1TRANSMEMBRANE PROTEIN 198 FAMILY MEMBER
LLU|FUN_031630-T1ANKYRIN REPEAT PROTEIN
LLU|FUN_031631-T1ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED
LLU|FUN_031632-T1
LLU|FUN_031633-T1
LLU|FUN_031634-T1
LLU|FUN_031635-T1
LLU|FUN_031636-T1-
LLU|FUN_031637-T1
LLU|FUN_031638-T1
LLU|FUN_031639-T1
LLU|FUN_031640-T1
LLU|FUN_031641-T1
LLU|FUN_031642-T14.1 G PROTEIN
LLU|FUN_031643-T1NETRIN RECEPTOR UNC5
LLU|FUN_031644-T1
LLU|FUN_031645-T1
LLU|FUN_031646-T1
LLU|FUN_031647-T1EXPRESSED PROTEIN
LLU|FUN_031648-T1-
LLU|FUN_031649-T1BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED
LLU|FUN_031650-T1HOMEOBOX PROTEIN ARISTALESS
LLU|FUN_031651-T1
LLU|FUN_031653-T1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
LLU|FUN_031654-T1
LLU|FUN_031655-T1
LLU|FUN_031656-T1
LLU|FUN_031657-T1
LLU|FUN_031658-T1ZINC FINGER PROTEIN
LLU|FUN_031659-T1
LLU|FUN_031660-T1
LLU|FUN_031661-T1
LLU|FUN_031662-T1
LLU|FUN_031663-T1
LLU|FUN_031664-T1GLUTATHIONE S-TRANSFERASE KAPPA
LLU|FUN_031665-T1UNCHARACTERIZED
LLU|FUN_031666-T1NUDIX HYDROLASE
LLU|FUN_031667-T1FAS-ASSOCIATED PROTEIN
LLU|FUN_031668-T1ZINC FINGER PROTEIN
LLU|FUN_031669-T1
LLU|FUN_031670-T1
LLU|FUN_031671-T1
LLU|FUN_031672-T1
LLU|FUN_031673-T1
LLU|FUN_031674-T1
LLU|FUN_031675-T1
LLU|FUN_031676-T1
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