About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_031677-T1JITTERBUG, ISOFORM N
LLU|FUN_031678-T1
LLU|FUN_031679-T1
LLU|FUN_031680-T1
LLU|FUN_031681-T1
LLU|FUN_031682-T1
LLU|FUN_031683-T1
LLU|FUN_031684-T1
LLU|FUN_031685-T1
LLU|FUN_031686-T1
LLU|FUN_031687-T1
LLU|FUN_031688-T1
LLU|FUN_031689-T1AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C
LLU|FUN_031690-T1
LLU|FUN_031691-T1
LLU|FUN_031692-T1CRUMBS FAMILY MEMBER
LLU|FUN_031693-T1
LLU|FUN_031694-T1CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
LLU|FUN_031695-T1
LLU|FUN_031696-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_031697-T1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
LLU|FUN_031698-T1DUMPY: SHORTER THAN WILD-TYPE
LLU|FUN_031699-T1ALKALINE CERAMIDASE
LLU|FUN_031700-T1
LLU|FUN_031701-T1SODIUM LEAK CHANNEL NON-SELECTIVE PROTEIN
LLU|FUN_031702-T1UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3
LLU|FUN_031703-T1
LLU|FUN_031704-T1CS DOMAIN-CONTAINING PROTEIN
LLU|FUN_031705-T1MYOSIN LIGHT CHAIN 1, 3
LLU|FUN_031706-T1
LLU|FUN_031707-T1
LLU|FUN_031708-T1ZGC:172121
LLU|FUN_031709-T1
LLU|FUN_031710-T1
LLU|FUN_031711-T1
LLU|FUN_031712-T1STEREOCILIN RELATED
LLU|FUN_031713-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_031714-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_031715-T1
LLU|FUN_031716-T1
LLU|FUN_031717-T1
LLU|FUN_031718-T1
LLU|FUN_031719-T1G-PROTEIN COUPLED RECEPTOR
LLU|FUN_031720-T1
LLU|FUN_031721-T1
LLU|FUN_031722-T1
LLU|FUN_031723-T1
LLU|FUN_031724-T1AAA-FAMILY ATPASE
LLU|FUN_031725-T1
LLU|FUN_031726-T1ANKYRIN REPEAT AND MYND DOMAIN PROTEIN 1
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