About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_032849-T1
LLU|FUN_032850-T1
LLU|FUN_032851-T1TESTIS-EXPRESSED PROTEIN 15
LLU|FUN_032852-T1
LLU|FUN_032853-T1CONNECTIVE TISSUE GROWTH FACTOR-RELATED
LLU|FUN_032854-T1QUIESCIN Q6-RELATED SULFHYDRYL OXIDASE
LLU|FUN_032855-T1
LLU|FUN_032856-T1
LLU|FUN_032857-T1
LLU|FUN_032858-T1
LLU|FUN_032859-T1E3 UBIQUITIN-PROTEIN LIGASE ATL42
LLU|FUN_032860-T1
LLU|FUN_032861-T1
LLU|FUN_032862-T1ORGANIC ANION TRANSPORTER
LLU|FUN_032863-T1GALACTOSIDE 2-L-FUCOSYLTRANSFERASE
LLU|FUN_032864-T1
LLU|FUN_032865-T1
LLU|FUN_032866-T1
LLU|FUN_032867-T1
LLU|FUN_032868-T1SI:DKEY-19B23.12-RELATED
LLU|FUN_032869-T1
LLU|FUN_032870-T1MADF DOMAIN TRANSCRIPTION FACTOR
LLU|FUN_032871-T1
LLU|FUN_032872-T1LEUCINE-RICH REPEAT-CONTAINING
LLU|FUN_032873-T1
LLU|FUN_032874-T1
LLU|FUN_032875-T1EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED
LLU|FUN_032876-T1
LLU|FUN_032877-T1HYALURONAN MEDIATED MOTILITY RECEPTOR
LLU|FUN_032878-T1RED PROTEIN IK FACTOR CYTOKINE IK
LLU|FUN_032879-T1ANOCTAMIN
LLU|FUN_032880-T1
LLU|FUN_032881-T1
LLU|FUN_032882-T1
LLU|FUN_032883-T1
LLU|FUN_032884-T1
LLU|FUN_032885-T1
LLU|FUN_032886-T1ALCOHOL DEHYDROGENASE
LLU|FUN_032887-T1
LLU|FUN_032888-T1
LLU|FUN_032889-T1
LLU|FUN_032890-T1
LLU|FUN_032891-T1
LLU|FUN_032892-T1
LLU|FUN_032893-T1NEUROTRANSMITTER GATED ION CHANNEL
LLU|FUN_032894-T1
LLU|FUN_032895-T1
LLU|FUN_032896-T1
LLU|FUN_032897-T1
LLU|FUN_032898-T1METHIONINE SULFOXIDE REDUCTASE
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