About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_033275-T1PRENYLTRANSFERASES
LLU|FUN_033276-T1UNCHARACTERIZED
LLU|FUN_033277-T1
LLU|FUN_033278-T1
LLU|FUN_033279-T1
LLU|FUN_033280-T1UNCHARACTERIZED
LLU|FUN_033281-T1PROTEIN EVA-1
LLU|FUN_033282-T1
LLU|FUN_033283-T1PROTEIN EVA-1
LLU|FUN_033284-T1RIBONUCLEASE
LLU|FUN_033285-T1
LLU|FUN_033286-T1RIBONUCLEASE
LLU|FUN_033287-T1
LLU|FUN_033288-T1
LLU|FUN_033289-T1
LLU|FUN_033290-T1
LLU|FUN_033291-T1
LLU|FUN_033292-T1GLYCOSYLTRANSFERASE
LLU|FUN_033293-T1GLYCOSYLTRANSFERASE
LLU|FUN_033294-T1GRIP-1 ASSOCIATED PROTEIN 1
LLU|FUN_033295-T1VOLTAGE-GATED POTASSIUM CHANNEL
LLU|FUN_033296-T1
LLU|FUN_033297-T1
LLU|FUN_033298-T1VOLTAGE-GATED POTASSIUM CHANNEL
LLU|FUN_033299-T1
LLU|FUN_033300-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 51
LLU|FUN_033301-T1OTU DOMAIN CONTAINING PROTEIN
LLU|FUN_033302-T1SERINE/THREONINE-PROTEIN KINASE PIM
LLU|FUN_033303-T1
LLU|FUN_033304-T1
LLU|FUN_033305-T1
LLU|FUN_033306-T1
LLU|FUN_033307-T1
LLU|FUN_033308-T1GLUTAMINE-TRNA LIGASE
LLU|FUN_033309-T1
LLU|FUN_033310-T1
LLU|FUN_033311-T1
LLU|FUN_033312-T1
LLU|FUN_033313-T1ER DEGRADATION-ENHANCING ALPHA-MANNOSIDASE-LIKE PROTEIN 2
LLU|FUN_033314-T1ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING PROTEIN 1
LLU|FUN_033315-T1IONOTROPIC RECEPTOR 20A-RELATED
LLU|FUN_033316-T1
LLU|FUN_033317-T1
LLU|FUN_033318-T1
LLU|FUN_033319-T1ETS
LLU|FUN_033320-T1F-BOX ONLY PROTEIN 7
LLU|FUN_033321-T1UBIQUITIN-ACTIVATING ENZYME E1
LLU|FUN_033322-T1PRA1 PROTEIN
LLU|FUN_033323-T1IONOTROPIC GLUTAMATE RECEPTOR
LLU|FUN_033324-T1
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