About Lamellibrachia luymesi

Lamellibrachia luymesi is a species of tube worms in the family Siboglinidae. It lives at deep-sea cold seeps where hydrocarbons (oil and methane) are leaking out of the seafloor. It is entirely reliant on internal, sulfide-oxidizing bacterial symbionts for its nutrition. These are located in a centrally located 'trophosome'. It provides the bacteria with hydrogen sulfide and oxygen by taking them up from the environment and binding them to a specialized hemoglobin molecule. It may help fuel the generation of sulfide by excreting sulfate through their roots into the sediments below the aggregations.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia luymesiAnnelidacold seep-dwelling tubeworm Lamellibrachia luymesiHydrothermal vent>540the Gulf of Mexico (N 28° 11.58′, W 89° 47.94′)238240

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
LLUY_1.0~688MbScaffold2019SDWI01Auburn UniversityPRJNA516467~95%38,998

References
TitleJournalPubmed ID
Genomic adaptations to chemosymbiosis in the deep-sea seep-dwelling tubeworm Lamellibrachia luymesiBMC Biology31739792

Gene Information

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Gene IDDescription
LLU|FUN_033425-T1
LLU|FUN_033426-T139S RIBOSOMAL PROTEIN L52, MITOCHONDRIAL
LLU|FUN_033427-T1CHRONIC MYELOGENOUS LEUKEMIA TUMOR ANTIGEN 66
LLU|FUN_033428-T1HEH2P
LLU|FUN_033429-T1
LLU|FUN_033430-T1
LLU|FUN_033431-T1
LLU|FUN_033432-T1PEPTIDASE
LLU|FUN_033433-T1
LLU|FUN_033434-T1
LLU|FUN_033435-T1
LLU|FUN_033436-T1DYNACTIN SUBUNIT 5
LLU|FUN_033437-T1
LLU|FUN_033438-T1
LLU|FUN_033439-T1
LLU|FUN_033440-T1
LLU|FUN_033441-T1
LLU|FUN_033442-T1
LLU|FUN_033443-T1
LLU|FUN_033444-T1ZINC FINGER PROTEIN
LLU|FUN_033446-T1AMINOMETHYLTRANSFERASE
LLU|FUN_033447-T1SARCOSINE DEHYDROGENASE-RELATED
LLU|FUN_033448-T1FUMARATE REDUCTASE
LLU|FUN_033449-T1NF-KAPPA-B INHIBITOR ALPHA
LLU|FUN_033450-T1NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING
LLU|FUN_033451-T1GUANINE NUCLEOTIDE-BINDING PROTEIN BETA G PROTEIN BETA
LLU|FUN_033452-T1
LLU|FUN_033453-T1
LLU|FUN_033454-T1CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18
LLU|FUN_033455-T1RHOMBOID-RELATED PROTEIN
LLU|FUN_033456-T1UNCHARACTERIZED
LLU|FUN_033457-T1
LLU|FUN_033458-T1
LLU|FUN_033459-T1
LLU|FUN_033460-T1
LLU|FUN_033461-T1
LLU|FUN_033462-T1
LLU|FUN_033463-T1
LLU|FUN_033464-T1RIBOSOMAL PROTEIN L7AE FAMILY MEMBER
LLU|FUN_033465-T1
LLU|FUN_033466-T1
LLU|FUN_033467-T1SODIUM/CALCIUM EXCHANGER
LLU|FUN_033468-T1RAB11-FAMILY INTERACTING PROTEIN
LLU|FUN_033469-T1WD-40 REPEAT PROTEIN
LLU|FUN_033470-T1CHECKPOINT SUPPRESSOR 1-LIKE, ISOFORM A-RELATED
LLU|FUN_033471-T1METEORIN-LIKE PROTEIN
LLU|FUN_033472-T1MUCIN-22
LLU|FUN_033473-T1DIACYLGLYCEROL KINASE
LLU|FUN_033474-T1
LLU|FUN_033475-T1
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