Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8029575.1 | BRCA1-ASSOCIATED PROTEIN |
| CAI8029577.1 | BRCA1-ASSOCIATED PROTEIN |
| CAI8029576.1 | BRCA1-ASSOCIATED PROTEIN |
| CAI8029574.1 | BRCA1-ASSOCIATED PROTEIN |
| CAI8029571.1 | BRCA1-ASSOCIATED PROTEIN |
| CAI8029573.1 | BRCA1-ASSOCIATED PROTEIN |
| CAI8029572.1 | BRCA1-ASSOCIATED PROTEIN |
| CAI8029578.1 | BRCA1-ASSOCIATED PROTEIN |
| CAI8029579.1 | |
| CAI8029580.1 | OXYGENASE-RELATED |
| CAI8029581.1 | OXYGENASE-RELATED |
| CAI8029582.1 | VILLIN |
| CAI8029583.1 | VILLIN |
| CAI8029584.1 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
| CAI8029585.1 | LP07818P1 |
| CAI8029586.1 | NICOTINATE-NUCLEOTIDE PYROPHOSPHORYLASE [CARBOXYLATING] |
| CAI8029587.1 | NICOTINATE-NUCLEOTIDE PYROPHOSPHORYLASE [CARBOXYLATING] |
| CAI8029588.1 | SARM1 |
| CAI8029592.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 13 |
| CAI8029591.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 13 |
| CAI8029590.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 13 |
| CAI8029589.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 13 |
| CAI8029593.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 13 |
| CAI8029595.1 | |
| CAI8029594.1 | |
| CAI8029596.1 | |
| CAI8029601.1 | EPIDERMAL GROWTH FACTOR RECEPTOR KINASE SUBSTRATE EPS8-RELATED PROTEIN |
| CAI8029604.1 | EPIDERMAL GROWTH FACTOR RECEPTOR KINASE SUBSTRATE EPS8-RELATED PROTEIN |
| CAI8029602.1 | EPIDERMAL GROWTH FACTOR RECEPTOR KINASE SUBSTRATE EPS8-RELATED PROTEIN |
| CAI8029603.1 | EPIDERMAL GROWTH FACTOR RECEPTOR KINASE SUBSTRATE EPS8-RELATED PROTEIN |
| CAI8029600.1 | EPIDERMAL GROWTH FACTOR RECEPTOR KINASE SUBSTRATE EPS8-RELATED PROTEIN |
| CAI8029598.1 | EPIDERMAL GROWTH FACTOR RECEPTOR KINASE SUBSTRATE EPS8-RELATED PROTEIN |
| CAI8029599.1 | |
| CAI8029597.1 | EPIDERMAL GROWTH FACTOR RECEPTOR KINASE SUBSTRATE EPS8-RELATED PROTEIN |
| CAI8029605.1 | EPIDERMAL GROWTH FACTOR RECEPTOR KINASE SUBSTRATE EPS8-RELATED PROTEIN |
| CAI8029608.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| CAI8029606.1 | ANKYRIN REPEAT, SAM AND BASIC LEUCINE ZIPPER DOMAIN-CONTAINING PROTEIN 1 |
| CAI8029607.1 | MASK PROTEIN |
| CAI8029609.1 | |
| CAI8029612.1 | |
| CAI8029611.1 | |
| CAI8029610.1 | |
| CAI8029613.1 | |
| CAI8029614.1 | |
| CAI8029615.1 | |
| CAI8029616.1 | L-ORNITHINE N(5)-MONOOXYGENASE-RELATED |
| CAI8029617.1 | DNA REPAIR/RNA PROCESSING CPSF FAMILY |
| CAI8029622.1 | LYSYL-TRNA SYNTHETASE |
| CAI8029620.1 | LYSYL-TRNA SYNTHETASE |
| CAI8029621.1 | LYSYL-TRNA SYNTHETASE |
