About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50%31,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI8029271.1MYOTUBULARIN-RELATED
CAI8029272.1MYOTUBULARIN-RELATED
CAI8029273.1MYOTUBULARIN-RELATED
CAI8029274.1MYOTUBULARIN-RELATED
CAI8029275.1MYOTUBULARIN-RELATED
CAI8029276.1MYOTUBULARIN-RELATED
CAI8029277.1
CAI8029278.1TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11
CAI8029279.1
CAI8029280.1HOMOSERINE DEHYDROGENASE
CAI8029283.13-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 3
CAI8029281.13-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 3
CAI8029282.13-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 3
CAI8029284.13-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 3
CAI8029285.13-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 3
CAI8029286.13-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 3
CAI8029287.1MALONYL-COA-ACYL CARRIER PROTEIN TRANSACYLASE, MITOCHONDRIAL
CAI8029288.1ACYL CARRIER PROTEIN
CAI8029289.1POLYKETIDE SYNTHASE-RELATED
CAI8029290.1SUCCINYL-COA SYNTHETASE BETA CHAIN
CAI8029291.1PHOSPHOGLYCERATE KINASE
CAI8029292.1PROLYL-TRNA SYNTHETASE
CAI8029293.13-METHYL-2-OXOBUTANOATE HYDROXYMETHYLTRANSFERASE
CAI8029294.1MULTIFUNCTIONAL TRYPTOPHAN BIOSYNTHESIS PROTEIN-RELATED
CAI8029299.1AMINOBENZOATE/ANTHRANILATE SYNTHASE
CAI8029296.1AMINOBENZOATE/ANTHRANILATE SYNTHASE
CAI8029297.1AMINOBENZOATE/ANTHRANILATE SYNTHASE
CAI8029298.1AMINOBENZOATE/ANTHRANILATE SYNTHASE
CAI8029295.1AMINOBENZOATE/ANTHRANILATE SYNTHASE
CAI8029301.1HISTIDINE BIOSYNTHESIS BIFUNCTIONAL PROTEIN
CAI8029300.1HISTIDINE BIOSYNTHESIS BIFUNCTIONAL PROTEIN
CAI8029302.1
CAI8029303.1ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED
CAI8029304.1D-XYLONATE DEHYDRATASE
CAI8029305.1PHOSPHORIBOSYLAMINOIMIDAZOLE CARBOXYLASE CATALYTIC SUBUNIT
CAI8029306.1
CAI8029307.1
CAI8029308.1
CAI8029309.14-HYDROXYTHREONINE-4-PHOSPHATE DEHYDROGENASE
CAI8029310.1ATP DEPENDENT LON PROTEASE FAMILY MEMBER
CAI8029311.1ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED
CAI8029316.1ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED
CAI8029320.1ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED
CAI8029317.1ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED
CAI8029319.1ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED
CAI8029318.1ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED
CAI8029315.1ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED
CAI8029313.1ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED
CAI8029314.1ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED
CAI8029312.1ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED
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