Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8029121.1 | |
| CAI8029122.1 | |
| CAI8029124.1 | EIF4G DOMAIN PROTEIN |
| CAI8029125.1 | |
| CAI8029123.1 | |
| CAI8029131.1 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| CAI8029132.1 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| CAI8029130.1 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| CAI8029129.1 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| CAI8029126.1 | |
| CAI8029133.1 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| CAI8029127.1 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| CAI8029128.1 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| CAI8029134.1 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| CAI8029136.1 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| CAI8029135.1 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| CAI8029137.1 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| CAI8029138.1 | |
| CAI8029139.1 | TGF-BETA FAMILY |
| CAI8029140.1 | SERINE-THREONINE PROTEIN KINASE |
| CAI8029141.1 | |
| CAI8029142.1 | IMMUNOGLOBULIN FC RECEPTOR |
| CAI8029143.1 | |
| CAI8029144.1 | |
| CAI8029145.1 | CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN |
| CAI8029146.1 | NEPHRIN |
| CAI8029147.1 | |
| CAI8029150.1 | SCP160 |
| CAI8029149.1 | SCP160 |
| CAI8029148.1 | SCP160 |
| CAI8029151.1 | |
| CAI8029152.1 | TUFTELIN-INTERACTING PROTEIN 11-RELATED |
| CAI8029154.1 | TUFTELIN-INTERACTING PROTEIN 11-RELATED |
| CAI8029153.1 | TUFTELIN-INTERACTING PROTEIN 11-RELATED |
| CAI8029155.1 | TUFTELIN-INTERACTING PROTEIN 11-RELATED |
| CAI8029156.1 | TUFTELIN-INTERACTING PROTEIN 11-RELATED |
| CAI8029157.1 | TUFTELIN-INTERACTING PROTEIN 11-RELATED |
| CAI8029158.1 | |
| CAI8029161.1 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
| CAI8029160.1 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
| CAI8029159.1 | |
| CAI8029162.1 | |
| CAI8029165.1 | DETERIN |
| CAI8029163.1 | |
| CAI8029164.1 | |
| CAI8029166.1 | |
| CAI8029167.1 | DETERIN |
| CAI8029168.1 | CELL DEATH REGULATOR AVEN |
| CAI8029169.1 | ZINC TRANSPORTER 6 |
| CAI8029170.1 | ZINC TRANSPORTER 6 |
