Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8029221.1 | |
| CAI8029228.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8029230.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8029229.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8029226.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8029225.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8029223.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8029224.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8029227.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8029222.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8029231.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8029232.1 | |
| CAI8029233.1 | |
| CAI8029234.1 | SUGAR HYDROLASE-RELATED |
| CAI8029235.1 | SUGAR HYDROLASE-RELATED |
| CAI8029236.1 | DYNEIN HEAVY CHAIN FAMILY PROTEIN |
| CAI8029237.1 | DYNEIN HEAVY CHAIN FAMILY PROTEIN |
| CAI8029240.1 | DYNEIN HEAVY CHAIN FAMILY PROTEIN |
| CAI8029239.1 | DYNEIN HEAVY CHAIN FAMILY PROTEIN |
| CAI8029238.1 | DYNEIN HEAVY CHAIN FAMILY PROTEIN |
| CAI8029241.1 | DYNEIN HEAVY CHAIN FAMILY PROTEIN |
| CAI8029242.1 | |
| CAI8029243.1 | |
| CAI8029244.1 | SUCCINATE DEHYDROGENASE |
| CAI8029245.1 | |
| CAI8029246.1 | JAK PATHWAY SIGNAL TRANSDUCTION ADAPTOR MOLECULE |
| CAI8029247.1 | JAK PATHWAY SIGNAL TRANSDUCTION ADAPTOR MOLECULE |
| CAI8029248.1 | JAK PATHWAY SIGNAL TRANSDUCTION ADAPTOR MOLECULE |
| CAI8029249.1 | JAK PATHWAY SIGNAL TRANSDUCTION ADAPTOR MOLECULE |
| CAI8029250.1 | |
| CAI8029251.1 | TENASCIN |
| CAI8029252.1 | |
| CAI8029253.1 | TENASCIN |
| CAI8029254.1 | SI:CH211-161H7.5-RELATED |
| CAI8029255.1 | |
| CAI8029256.1 | |
| CAI8029257.1 | CYTOKINE RECEPTOR |
| CAI8029258.1 | |
| CAI8029260.1 | |
| CAI8029261.1 | |
| CAI8029259.1 | |
| CAI8029262.1 | |
| CAI8029263.1 | |
| CAI8029264.1 | LUPUS LA PROTEIN-RELATED |
| CAI8029268.1 | MYOTUBULARIN-RELATED |
| CAI8029269.1 | MYOTUBULARIN-RELATED |
| CAI8029267.1 | MYOTUBULARIN-RELATED |
| CAI8029266.1 | MYOTUBULARIN-RELATED |
| CAI8029265.1 | MYOTUBULARIN-RELATED |
| CAI8029270.1 | MYOTUBULARIN-RELATED |
