Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8029371.1 | VILLIN |
| CAI8029372.1 | VILLIN |
| CAI8029375.1 | IMPORTIN BETA |
| CAI8029374.1 | IMPORTIN BETA |
| CAI8029373.1 | |
| CAI8029376.1 | |
| CAI8029378.1 | MASK PROTEIN |
| CAI8029379.1 | SI:CH211-189E2.2 |
| CAI8029377.1 | MASK PROTEIN |
| CAI8029380.1 | |
| CAI8029381.1 | |
| CAI8029382.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8029383.1 | SH2-SH3 ADAPTOR PROTEIN-RELATED |
| CAI8029384.1 | SH2-SH3 ADAPTOR PROTEIN-RELATED |
| CAI8029388.1 | |
| CAI8029387.1 | |
| CAI8029385.1 | |
| CAI8029386.1 | |
| CAI8029391.1 | CALCIUM-INDEPENDENT PHOSPHOLIPASE A2 |
| CAI8029390.1 | CALCIUM-INDEPENDENT PHOSPHOLIPASE A2 |
| CAI8029389.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8029392.1 | |
| CAI8029393.1 | |
| CAI8029394.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8029396.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8029395.1 | |
| CAI8029397.1 | |
| CAI8029398.1 | |
| CAI8029399.1 | |
| CAI8029400.1 | |
| CAI8029401.1 | |
| CAI8029403.1 | |
| CAI8029402.1 | |
| CAI8029405.1 | |
| CAI8029404.1 | |
| CAI8029406.1 | |
| CAI8029407.1 | AMINO ACID AMINOTRANSFERASE |
| CAI8029408.1 | MULTIFUNCTIONAL TRYPTOPHAN BIOSYNTHESIS PROTEIN-RELATED |
| CAI8029409.1 | AMINOBENZOATE/ANTHRANILATE SYNTHASE |
| CAI8029410.1 | UNCHARACTERIZED PROTEIN TLDD AND PMBA |
| CAI8029411.1 | |
| CAI8029412.1 | |
| CAI8029413.1 | |
| CAI8029414.1 | |
| CAI8029418.1 | NITRILASE-RELATED |
| CAI8029417.1 | NITRILASE-RELATED |
| CAI8029416.1 | NITRILASE-RELATED |
| CAI8029415.1 | NITRILASE-RELATED |
| CAI8029419.1 | REGULATOR OF RPOS |
| CAI8029420.1 |
