Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8029421.1 | |
| CAI8029422.1 | |
| CAI8029423.1 | |
| CAI8029424.1 | |
| CAI8029425.1 | SARCOSINE DEHYDROGENASE-RELATED |
| CAI8029426.1 | OXIDOREDUCTASE-RELATED |
| CAI8029427.1 | DNA GYRASE/TOPOISOMERASE SUBUNIT A |
| CAI8029428.1 | DNA GYRASE/TOPOISOMERASE SUBUNIT A |
| CAI8029429.1 | DNA GYRASE/TOPOISOMERASE SUBUNIT A |
| CAI8029430.1 | - |
| CAI8029431.1 | TRANSPOSASE INSH FOR INSERTION SEQUENCE ELEMENT IS5A-RELATED |
| CAI8029432.1 | |
| CAI8029437.1 | OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN APPD |
| CAI8029436.1 | OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN APPD |
| CAI8029438.1 | TRANSPORT ATP-BINDING PROTEIN |
| CAI8029435.1 | OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN APPD |
| CAI8029434.1 | OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN APPD |
| CAI8029433.1 | OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN APPD |
| CAI8029439.1 | TRANSPORT ATP-BINDING PROTEIN |
| CAI8029440.1 | |
| CAI8029441.1 | TRANSPORT ATP-BINDING PROTEIN |
| CAI8029442.1 | |
| CAI8029446.1 | OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN APPD |
| CAI8029447.1 | TRANSPORT ATP-BINDING PROTEIN |
| CAI8029445.1 | OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN APPD |
| CAI8029444.1 | OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN APPD |
| CAI8029443.1 | OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN APPD |
| CAI8029448.1 | OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN APPD |
| CAI8029449.1 | |
| CAI8029450.1 | TMRNA-BINDING COMPONENT OF TRANS-TRANSLATION TAGGING COMPLEX |
| CAI8029451.1 | REGUCALCIN |
| CAI8029455.1 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED |
| CAI8029454.1 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED |
| CAI8029453.1 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED |
| CAI8029452.1 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED |
| CAI8029456.1 | PYRUVATE DEHYDROGENASE E1 COMPONENT |
| CAI8029457.1 | DIHYDROLIPOAMIDE ACETYLTRANSFERASE COMPONENT OF PYRUVATE DEHYDROGENASE COMPLEX |
| CAI8029458.1 | DISULFIDE OXIDOREDUCTASE |
| CAI8029459.1 | |
| CAI8029460.1 | |
| CAI8029461.1 | |
| CAI8029463.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8029462.1 | BONUS, ISOFORM C-RELATED |
| CAI8029464.1 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
| CAI8029465.1 | |
| CAI8029466.1 | 28S RIBOSOMAL PROTEIN S34, MITOCHONDRIAL |
| CAI8029467.1 | BICOID-INTERACTING PROTEIN RELATED |
| CAI8029468.1 | BICOID-INTERACTING PROTEIN RELATED |
| CAI8029469.1 | BICOID-INTERACTING PROTEIN RELATED |
| CAI8029471.1 | GATOR COMPLEX PROTEIN WDR59 |
