Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI7995166.1 | 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE |
| CAI7995170.1 | COILED-COIL DOMAIN-CONTAINING PROTEIN 157 |
| CAI7995168.1 | PHOSPHOSERINE PHOSPHATASE |
| CAI7995174.1 | SIMILAR TO HYPOTHETICAL PROTEIN |
| CAI7995172.1 | |
| CAI7995176.1 | CT120 PROTEIN |
| CAI7995178.1 | CT120 PROTEIN |
| CAI7995180.1 | UNCHARACTERIZED |
| CAI7995184.1 | CHAPERONIN |
| CAI7995182.1 | CHAPERONIN |
| CAI7995186.1 | CHAPERONIN |
| CAI7995190.1 | CHAPERONIN |
| CAI7995188.1 | CHAPERONIN |
| CAI7995192.1 | CHAPERONIN |
| CAI7995194.1 | LEISHMANOLYSIN-LIKE PEPTIDASE |
| CAI7995196.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM37 |
| CAI7995203.1 | |
| CAI7995205.1 | |
| CAI7995213.1 | ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| CAI7995211.1 | PROTEIN TORNADO 1 |
| CAI7995209.1 | MYOTROPHIN |
| CAI7995207.1 | MYOTROPHIN |
| CAI7995215.1 | PROTEIN TORNADO 1 |
| CAI7995217.1 | |
| CAI7995229.1 | |
| CAI7995227.1 | |
| CAI7995225.1 | |
| CAI7995239.1 | MANNAN ENDO-1,4-BETA-MANNOSIDASE 7 |
| CAI7995241.1 | MANNAN ENDO-1,4-BETA-MANNOSIDASE 7 |
| CAI7995237.1 | MANNAN ENDO-1,4-BETA-MANNOSIDASE 7 |
| CAI7995235.1 | MANNAN ENDO-1,4-BETA-MANNOSIDASE 7 |
| CAI7995233.1 | |
| CAI7995231.1 | |
| CAI7995243.1 | |
| CAI7995251.1 | MANNAN ENDO-1,4-BETA-MANNOSIDASE 7 |
| CAI7995249.1 | MANNAN ENDO-1,4-BETA-MANNOSIDASE 7 |
| CAI7995247.1 | |
| CAI7995245.1 | |
| CAI7995253.1 | MANNAN ENDO-1,4-BETA-MANNOSIDASE 7 |
| CAI7995255.1 | |
| CAI7995259.1 | C3ORF1 PROTEIN-RELATED |
| CAI7995257.1 | C3ORF1 PROTEIN-RELATED |
| CAI7995261.1 | NITROGEN PERMEASE REGULATOR 2/TUMOR SUPPRESSOR CANDIDATE 4 |
| CAI7995263.1 | PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN |
| CAI7995265.1 | |
| CAI7995267.1 | |
| CAI7995272.1 | |
| CAI7995274.1 | |
| CAI7995276.1 | |
| CAI7995278.1 |
