Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI7995422.1 | |
| CAI7995424.1 | |
| CAI7995426.1 | HUNTINGTON DISEASE PROTEIN |
| CAI7995428.1 | HUNTINGTON DISEASE PROTEIN |
| CAI7995430.1 | |
| CAI7995432.1 | HUNTINGTON DISEASE PROTEIN |
| CAI7995434.1 | HUNTINGTON DISEASE PROTEIN |
| CAI7995438.1 | HUNTINGTON DISEASE PROTEIN |
| CAI7995436.1 | HUNTINGTON DISEASE PROTEIN |
| CAI7995440.1 | HUNTINGTON DISEASE PROTEIN |
| CAI7995442.1 | UNCHARACTERIZED |
| CAI7995446.1 | MRG-BINDING PROTEIN |
| CAI7995444.1 | MRG-BINDING PROTEIN |
| CAI7995448.1 | |
| CAI7995452.1 | |
| CAI7995450.1 | |
| CAI7995454.1 | |
| CAI7995456.1 | |
| CAI7995462.1 | GLIOMA TUMOR SUPPRESSOR CANDIDATE REGION GENE 1 |
| CAI7995464.1 | |
| CAI7995458.1 | |
| CAI7995460.1 | |
| CAI7995470.1 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| CAI7995468.1 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| CAI7995472.1 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| CAI7995466.1 | |
| CAI7995480.1 | GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED |
| CAI7995478.1 | U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14 |
| CAI7995474.1 | GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED |
| CAI7995476.1 | GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED |
| CAI7995482.1 | |
| CAI7995484.1 | |
| CAI7995486.1 | TRANSPORTER ARSB-RELATED |
| CAI7995488.1 | |
| CAI7995490.1 | |
| CAI7995492.1 | TRANSPORTER ARSB-RELATED |
| CAI7995494.1 | |
| CAI7995498.1 | 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATED |
| CAI7995496.1 | 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATED |
| CAI7995500.1 | 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATED |
| CAI7995504.1 | FCH AND DOUBLE SH3 DOMAINS PROTEIN |
| CAI7995502.1 | |
| CAI7995506.1 | FCH AND DOUBLE SH3 DOMAINS PROTEIN |
| CAI7995524.1 | FACTOR VIII-ASSOCIATED GENE 1 |
| CAI7995526.1 | |
| CAI7995528.1 | |
| CAI7995532.1 | |
| CAI7995530.1 | |
| CAI7995534.1 | SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS |
| CAI7995536.1 |
