Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI7995538.1 | |
| CAI7995540.1 | |
| CAI7995548.1 | |
| CAI7995546.1 | UBIQUITIN-LIKE DOMAIN-CONTAINING PROTEIN |
| CAI7995544.1 | UBIQUITIN-LIKE DOMAIN-CONTAINING PROTEIN |
| CAI7995542.1 | |
| CAI7995550.1 | |
| CAI7995552.1 | SULFOTRANSFERASE SULT |
| CAI7995554.1 | SYNAPTOTAGMIN |
| CAI7995556.1 | |
| CAI7995558.1 | |
| CAI7995564.1 | TALIN |
| CAI7995566.1 | TALIN |
| CAI7995562.1 | TALIN |
| CAI7995560.1 | |
| CAI7995568.1 | TALIN |
| CAI7995570.1 | |
| CAI7995574.1 | |
| CAI7995572.1 | |
| CAI7995582.1 | BETA-LACTAMASE-RELATED |
| CAI7995580.1 | BETA-LACTAMASE-RELATED |
| CAI7995578.1 | BETA-LACTAMASE-RELATED |
| CAI7995576.1 | BETA-LACTAMASE-RELATED |
| CAI7995584.1 | BETA-LACTAMASE-RELATED |
| CAI7995594.1 | CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED |
| CAI7995588.1 | CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED |
| CAI7995586.1 | CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED |
| CAI7995590.1 | CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED |
| CAI7995592.1 | |
| CAI7995599.1 | TAURINE IMPORT ATP-BINDING PROTEIN-RELATED |
| CAI7995601.1 | TAURINE IMPORT ATP-BINDING PROTEIN-RELATED |
| CAI7995603.1 | TAURINE IMPORT ATP-BINDING PROTEIN-RELATED |
| CAI7995605.1 | TAURINE IMPORT ATP-BINDING PROTEIN-RELATED |
| CAI7995607.1 | TAURINE IMPORT ATP-BINDING PROTEIN-RELATED |
| CAI7995609.1 | TAURINE IMPORT ATP-BINDING PROTEIN-RELATED |
| CAI7995613.1 | TAURINE IMPORT ATP-BINDING PROTEIN-RELATED |
| CAI7995611.1 | TAURINE IMPORT ATP-BINDING PROTEIN-RELATED |
| CAI7995615.1 | STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL |
| CAI7995617.1 | |
| CAI7995623.1 | MASK PROTEIN |
| CAI7995625.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| CAI7995627.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| CAI7995629.1 | |
| CAI7995621.1 | |
| CAI7995631.1 | CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATED |
| CAI7995634.1 | |
| CAI7995636.1 | EXPORTIN 4,7-RELATED |
| CAI7995638.1 | |
| CAI7995651.1 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4 |
| CAI7995653.1 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4 |
