Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI7994690.1 | |
| CAI7994684.1 | |
| CAI7994686.1 | |
| CAI7994692.1 | |
| CAI7994694.1 | ERGOTHIONEINE BIOSYNTHESIS PROTEIN 1 |
| CAI7994710.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| CAI7994706.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| CAI7994704.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| CAI7994708.1 | PROTEIN CBR-CLEC-78 |
| CAI7994702.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| CAI7994700.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| CAI7994714.1 | PROTEIN CBR-CLEC-78 |
| CAI7994712.1 | PROTEIN CBR-CLEC-78 |
| CAI7994698.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| CAI7994722.1 | RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN |
| CAI7994724.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI7994726.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI7994728.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI7994730.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI7994734.1 | ANNEXIN |
| CAI7994732.1 | ANNEXIN |
| CAI7994736.1 | ANNEXIN |
| CAI7994738.1 | ANNEXIN |
| CAI7994740.1 | ANNEXIN |
| CAI7994742.1 | ANNEXIN |
| CAI7994746.1 | CYTOKINE RECEPTOR |
| CAI7994744.1 | |
| CAI7994748.1 | |
| CAI7994756.1 | |
| CAI7994758.1 | OXYGENASE-RELATED |
| CAI7994760.1 | |
| CAI7994762.1 | FES CLUSTER ASSEMBLY PROTEIN SUF |
| CAI7994764.1 | FES CLUSTER ASSEMBLY PROTEIN SUF |
| CAI7994766.1 | PROTEIN ABCI7, CHLOROPLASTIC |
| CAI7994768.1 | CYSTEINE DESULFURASE |
| CAI7994770.1 | FE-S PROTEIN MATURATION AUXILIARY FACTOR YITW |
| CAI7994772.1 | |
| CAI7994774.1 | COLANIC BIOSYNTHESIS UDP-GLUCOSE LIPID CARRIER TRANSFERASE |
| CAI7994776.1 | PEPTIDE DEFORMYLASE |
| CAI7994778.1 | EXSB FAMILY PROTEIN |
| CAI7994782.1 | GLUTAMINE SYNTHETASE |
| CAI7994780.1 | GLUTAMINE SYNTHETASE |
| CAI7994784.1 | GLUTAMINE SYNTHETASE |
| CAI7994786.1 | |
| CAI7994794.1 | DYNEIN INTERMEDIATE CHAIN |
| CAI7994792.1 | DYNEIN INTERMEDIATE CHAIN |
| CAI7994796.1 | DYNEIN INTERMEDIATE CHAIN |
| CAI7994798.1 | MRNA TURNOVER PROTEIN 4 MRTO4 |
| CAI7994800.1 | |
| CAI7994802.1 | WSCD FAMILY MEMBER CG9164 |
