Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI7994250.1 | |
| CAI7994252.1 | |
| CAI7994254.1 | |
| CAI7994256.1 | |
| CAI7994258.1 | BETA-GALACTOSIDASE RELATED |
| CAI7994264.1 | BETA-GALACTOSIDASE RELATED |
| CAI7994266.1 | BETA-GALACTOSIDASE RELATED |
| CAI7994262.1 | BETA-GALACTOSIDASE RELATED |
| CAI7994260.1 | BETA-GALACTOSIDASE RELATED |
| CAI7994267.1 | |
| CAI7994271.1 | BETA-GALACTOSIDASE RELATED |
| CAI7994269.1 | BETA-GALACTOSIDASE RELATED |
| CAI7994273.1 | BETA-GALACTOSIDASE RELATED |
| CAI7994275.1 | |
| CAI7994283.1 | ALPHA-MANNOSIDASE |
| CAI7994285.1 | ALPHA-MANNOSIDASE |
| CAI7994287.1 | ALPHA-MANNOSIDASE |
| CAI7994281.1 | |
| CAI7994279.1 | |
| CAI7994277.1 | |
| CAI7994289.1 | |
| CAI7994291.1 | |
| CAI7994293.1 | TELOMERE-ASSOCIATED PROTEIN RIF1 |
| CAI7994295.1 | TELOMERE-ASSOCIATED PROTEIN RIF1 |
| CAI7994297.1 | TELOMERE-ASSOCIATED PROTEIN RIF1 |
| CAI7994299.1 | |
| CAI7994309.1 | |
| CAI7994311.1 | |
| CAI7994317.1 | PHOSPHOLIPASE A-2-ACTIVATING PROTEIN |
| CAI7994319.1 | PHOSPHOLIPASE A-2-ACTIVATING PROTEIN |
| CAI7994315.1 | PHOSPHOLIPASE A-2-ACTIVATING PROTEIN |
| CAI7994313.1 | |
| CAI7994321.1 | PHOSPHOLIPASE A-2-ACTIVATING PROTEIN |
| CAI7994323.1 | RIDDLE |
| CAI7994329.1 | |
| CAI7994331.1 | |
| CAI7994333.1 | |
| CAI7994327.1 | |
| CAI7994325.1 | |
| CAI7994335.1 | |
| CAI7994337.1 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN |
| CAI7994339.1 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN |
| CAI7994347.1 | CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED |
| CAI7994345.1 | CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED |
| CAI7994343.1 | CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED |
| CAI7994341.1 | CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED |
| CAI7994349.1 | CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED |
| CAI7994351.1 | CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED |
| CAI7994353.1 | CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED |
| CAI7994355.1 |
