Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI7994362.1 | DNAJ-LIKE-2, ISOFORM A-RELATED |
| CAI7994360.1 | DNAJ-LIKE-2, ISOFORM A-RELATED |
| CAI7994358.1 | DNAJ-LIKE-2, ISOFORM A-RELATED |
| CAI7994383.1 | PROTEIN IWS1 HOMOLOG |
| CAI7994382.1 | PROTEIN IWS1 HOMOLOG |
| CAI7994384.1 | |
| CAI7994385.1 | |
| CAI7994386.1 | |
| CAI7994388.1 | POTASSIUM/PROTON ANTIPORTER-RELATED |
| CAI7994387.1 | POTASSIUM/PROTON ANTIPORTER-RELATED |
| CAI7994389.1 | POTASSIUM/PROTON ANTIPORTER-RELATED |
| CAI7994390.1 | POTASSIUM/PROTON ANTIPORTER-RELATED |
| CAI7994391.1 | ZINC FINGER B-BOX DOMAIN-CONTAINING PROTEIN 1 |
| CAI7994392.1 | PROTEIN C20ORF43 HOMOLOG |
| CAI7994393.1 | PROTEIN C20ORF43 HOMOLOG |
| CAI7994395.1 | |
| CAI7994394.1 | ZINC FINGER HIT DOMAIN CONTAINING PROTEIN 1 |
| CAI7994396.1 | |
| CAI7994397.1 | |
| CAI7994400.1 | BTK-BINDING PROTEIN-RELATED |
| CAI7994399.1 | BTK-BINDING PROTEIN-RELATED |
| CAI7994398.1 | SPECKLE-TYPE POZ PROTEIN |
| CAI7994401.1 | |
| CAI7994403.1 | REGULATOR OF CHROMOSOME CONDENSATION |
| CAI7994402.1 | |
| CAI7994404.1 | BTK-BINDING PROTEIN-RELATED |
| CAI7994405.1 | REGULATOR OF CHROMOSOME CONDENSATION |
| CAI7994406.1 | |
| CAI7994410.1 | |
| CAI7994409.1 | |
| CAI7994408.1 | |
| CAI7994407.1 | |
| CAI7994411.1 | |
| CAI7994414.1 | |
| CAI7994413.1 | AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT |
| CAI7994412.1 | AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT |
| CAI7994415.1 | AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT |
| CAI7994416.1 | AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT |
| CAI7994417.1 | AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT |
| CAI7994418.1 | AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT |
| CAI7994419.1 | CAVEOLIN |
| CAI7994420.1 | CAVEOLIN |
| CAI7994422.1 | CONTACTIN 5 |
| CAI7994423.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI7994421.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI7994424.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI7994426.1 | TUBULIN |
| CAI7994427.1 | TUBULIN |
| CAI7994428.1 | TUBULIN |
| CAI7994425.1 | TUBULIN |
