Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI7994479.1 | CARBOXYLIC ESTER HYDROLASE |
| CAI7994480.1 | CARBOXYLIC ESTER HYDROLASE |
| CAI7994481.1 | ACETYLORNITHINE DEACETYLASE |
| CAI7994482.1 | MOLTING PROTEIN MLT-4 |
| CAI7994483.1 | RHOMBOID-RELATED PROTEIN |
| CAI7994484.1 | RHOMBOID-RELATED PROTEIN |
| CAI7994485.1 | |
| CAI7994492.1 | UV RADIATION RESISTANCE-ASSOCIATED GENE PROTEIN |
| CAI7994491.1 | UV RADIATION RESISTANCE-ASSOCIATED GENE PROTEIN |
| CAI7994490.1 | UV RADIATION RESISTANCE-ASSOCIATED GENE PROTEIN |
| CAI7994489.1 | UV RADIATION RESISTANCE-ASSOCIATED GENE PROTEIN |
| CAI7994488.1 | UV RADIATION RESISTANCE-ASSOCIATED GENE PROTEIN |
| CAI7994487.1 | UV RADIATION RESISTANCE-ASSOCIATED GENE PROTEIN |
| CAI7994486.1 | ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY |
| CAI7994493.1 | |
| CAI7994494.1 | COMPONENT OF OLIGOMERIC GOLGI COMPLEX 6 |
| CAI7994495.1 | TRANSMEMBRANE PROTEIN FAM155 |
| CAI7994497.1 | RIBONUCLEASE H2 SUBUNIT B |
| CAI7994496.1 | RIBONUCLEASE H2 SUBUNIT B |
| CAI7994498.1 | |
| CAI7994499.1 | |
| CAI7994500.1 | |
| CAI7994501.1 | |
| CAI7994502.1 | |
| CAI7994503.1 | DYNEIN HEAVY CHAIN FAMILY PROTEIN |
| CAI7994504.1 | |
| CAI7994506.1 | |
| CAI7994505.1 | |
| CAI7994507.1 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE D |
| CAI7994508.1 | CELL SHAPE-DETERMINING PROTEIN MREB |
| CAI7994509.1 | CELL CYCLE PROTEIN |
| CAI7994510.1 | CELL CYCLE PROTEIN |
| CAI7994511.1 | SODIUM/NUCLEOSIDE COTRANSPORTER |
| CAI7994513.1 | METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE |
| CAI7994512.1 | METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE |
| CAI7994516.1 | METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE |
| CAI7994515.1 | METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE |
| CAI7994514.1 | METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE |
| CAI7994517.1 | METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE |
| CAI7994520.1 | METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE |
| CAI7994518.1 | METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE |
| CAI7994519.1 | METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE |
| CAI7994521.1 | METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE |
| CAI7994522.1 | ABC TRANSPORTER, ATP-BINDING PROTEIN |
| CAI7994527.1 | DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER |
| CAI7994528.1 | DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER |
| CAI7994529.1 | DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER |
| CAI7994526.1 | DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER |
| CAI7994525.1 | DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER |
| CAI7994524.1 | DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER |
