About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50%31,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI7994019.1CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 54
CAI7994017.1CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 54
CAI7994015.1CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 54
CAI7994023.1CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 54
CAI7994025.1MITOGEN-ACTIVATED PROTEIN KINASE
CAI7994027.1MITOGEN-ACTIVATED PROTEIN KINASE
CAI7994033.1MITOGEN-ACTIVATED PROTEIN KINASE
CAI7994029.1MITOGEN-ACTIVATED PROTEIN KINASE
CAI7994036.1MITOGEN-ACTIVATED PROTEIN KINASE
CAI7994031.1MITOGEN-ACTIVATED PROTEIN KINASE
CAI7994040.1GLUTATHIONE S-TRANSFERASE
CAI7994038.1GLUTATHIONE S-TRANSFERASE
CAI7994044.1TRNA 5-METHYLAMINOMETHYL-2-THIOURIDYLATE -METHYLTRANSFERASE
CAI7994042.1TRNA 5-METHYLAMINOMETHYL-2-THIOURIDYLATE -METHYLTRANSFERASE
CAI7994046.1LEISHMANOLYSIN-LIKE PEPTIDASE
CAI7994048.1PROTEIN MCM10 HOMOLOG
CAI7994054.1SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL
CAI7994056.1SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL
CAI7994050.1SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL
CAI7994052.1SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL
CAI7994058.1SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL
CAI7994060.1SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL
CAI7994064.1TRANSLOCON-ASSOCIATED PROTEIN TRAP , GAMMA SUBUNIT
CAI7994066.1TRANSLOCON-ASSOCIATED PROTEIN TRAP , GAMMA SUBUNIT
CAI7994062.1TRANSLOCON-ASSOCIATED PROTEIN TRAP , GAMMA SUBUNIT
CAI7994068.1TRANSLOCON-ASSOCIATED PROTEIN TRAP , GAMMA SUBUNIT
CAI7994070.1
CAI7994072.1TRANSLOCON-ASSOCIATED PROTEIN TRAP , GAMMA SUBUNIT
CAI7994074.1
CAI7994076.1UNCHARACTERIZED
CAI7994078.1COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 6
CAI7994082.1ORF PROTEIN
CAI7994080.1ORF PROTEIN
CAI7994092.1SORTILIN RELATED
CAI7994090.1SORTILIN RELATED
CAI7994088.1SORTILIN RELATED
CAI7994086.1SORTILIN RELATED
CAI7994084.1SORTILIN RELATED
CAI7994094.1MITOCHONDRIAL RIBOSOMAL PROTEIN S25
CAI7994096.1KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED
CAI7994098.1KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED
CAI7994100.1
CAI7994113.1GLUTAMATE DEHYDROGENASE
CAI7994115.1GLUTAMATE DEHYDROGENASE
CAI7994117.1ATP7, ISOFORM B
CAI7994119.1PEPTIDE DEFORMYLASE
CAI7994121.1PEPTIDE DEFORMYLASE
CAI7994123.1METHIONYL-TRNA FORMYLTRANSFERASE
CAI7994125.1NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING
CAI7994127.1
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