Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI7993352.1 | UNCHARACTERIZED |
| CAI7993348.1 | UNCHARACTERIZED |
| CAI7993346.1 | UNCHARACTERIZED |
| CAI7993354.1 | |
| CAI7993358.1 | TESTICULAR HAPLOID EXPRESSED GENE PROTEIN |
| CAI7993356.1 | TESTICULAR HAPLOID EXPRESSED GENE PROTEIN |
| CAI7993360.1 | TESTICULAR HAPLOID EXPRESSED GENE PROTEIN |
| CAI7993362.1 | TESTICULAR HAPLOID EXPRESSED GENE PROTEIN |
| CAI7993364.1 | 54S RIBOSOMAL PROTEIN BL35M |
| CAI7993366.1 | PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN |
| CAI7993368.1 | PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN |
| CAI7993374.1 | UNCHARACTERIZED |
| CAI7993372.1 | UNCHARACTERIZED |
| CAI7993378.1 | UNCHARACTERIZED |
| CAI7993376.1 | UNCHARACTERIZED |
| CAI7993370.1 | UNCHARACTERIZED |
| CAI7993380.1 | UNCHARACTERIZED |
| CAI7993382.1 | UNCHARACTERIZED |
| CAI7993384.1 | UNCHARACTERIZED |
| CAI7993386.1 | |
| CAI7993392.1 | UBIQUITIN THIOESTERASE |
| CAI7993390.1 | UBIQUITIN THIOESTERASE |
| CAI7993388.1 | UBIQUITIN THIOESTERASE |
| CAI7993396.1 | UBIQUITIN THIOESTERASE |
| CAI7993394.1 | UBIQUITIN THIOESTERASE |
| CAI7993398.1 | UBIQUITIN THIOESTERASE |
| CAI7993408.1 | RAD50 |
| CAI7993410.1 | RAD50 |
| CAI7993406.1 | RAD50 |
| CAI7993404.1 | RAD50 |
| CAI7993402.1 | RAD50 |
| CAI7993400.1 | RAD50 |
| CAI7993412.1 | RAD50 |
| CAI7993414.1 | |
| CAI7993416.1 | |
| CAI7993418.1 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
| CAI7993423.1 | CAIB/BAIF FAMILY ENZYME (AFU_ORTHOLOGUE AFUA_1G05360)-RELATED |
| CAI7993425.1 | RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER |
| CAI7993427.1 | RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER |
| CAI7993429.1 | |
| CAI7993434.1 | ATAXIA TELANGIECTASIA MUTATED ATM -RELATED |
| CAI7993440.1 | DEOXYNUCLEOSIDE KINASE |
| CAI7993438.1 | DEOXYNUCLEOSIDE KINASE |
| CAI7993436.1 | DEOXYNUCLEOSIDE KINASE |
| CAI7993473.1 | |
| CAI7993475.1 | |
| CAI7993477.1 | |
| CAI7993479.1 | PYRIDINE NUCLEOTIDE-DISULFIDE OXIDOREDUCTASE DOMAIN-CONTAINING |
| CAI7993483.1 | PYRIDINE NUCLEOTIDE-DISULFIDE OXIDOREDUCTASE DOMAIN-CONTAINING |
| CAI7993481.1 | PYRIDINE NUCLEOTIDE-DISULFIDE OXIDOREDUCTASE DOMAIN-CONTAINING |
