Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI7992923.1 | INNER MEMBRANE PROTEIN YEDE |
| CAI7992926.1 | TYROSINE-PROTEIN KINASE |
| CAI7992928.1 | TYROSINE-PROTEIN KINASE |
| CAI7992936.1 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
| CAI7992938.1 | |
| CAI7992942.1 | |
| CAI7992940.1 | |
| CAI7992944.1 | |
| CAI7992946.1 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
| CAI7992948.1 | |
| CAI7992950.1 | |
| CAI7992954.1 | |
| CAI7992952.1 | |
| CAI7992958.1 | |
| CAI7992960.1 | |
| CAI7992956.1 | |
| CAI7992962.1 | |
| CAI7992964.1 | |
| CAI7992966.1 | |
| CAI7992968.1 | |
| CAI7992970.1 | |
| CAI7992972.1 | |
| CAI7992974.1 | |
| CAI7992978.1 | FIBRILLIN-RELATED |
| CAI7992982.1 | FIBRILLIN-RELATED |
| CAI7992984.1 | FIBRILLIN-RELATED |
| CAI7992980.1 | PA14 DOMAIN-CONTAINING PROTEIN |
| CAI7992986.1 | |
| CAI7992990.1 | PA14 DOMAIN-CONTAINING PROTEIN |
| CAI7992988.1 | PA14 DOMAIN-CONTAINING PROTEIN |
| CAI7992994.1 | PA14 DOMAIN-CONTAINING PROTEIN |
| CAI7992992.1 | PA14 DOMAIN-CONTAINING PROTEIN |
| CAI7993001.1 | ZINC PHOSPHODIESTERASE ELAC PROTEIN 1 |
| CAI7993005.1 | HUNTINGTIN INTERACTING PROTEIN 1 |
| CAI7993003.1 | HUNTINGTIN INTERACTING PROTEIN 1 |
| CAI7993009.1 | TRAF-TYPE ZINC FINGER PROTEIN-RELATED |
| CAI7993007.1 | TRAF-TYPE ZINC FINGER PROTEIN-RELATED |
| CAI7993011.1 | TRAF-TYPE ZINC FINGER PROTEIN-RELATED |
| CAI7993013.1 | |
| CAI7993015.1 | |
| CAI7993019.1 | DER1-LIKE PROTEIN, DERLIN |
| CAI7993017.1 | DER1-LIKE PROTEIN, DERLIN |
| CAI7993021.1 | |
| CAI7993023.1 | |
| CAI7993027.1 | GH02722P |
| CAI7993025.1 | GH02722P |
| CAI7993039.1 | ADIPOR/PROGESTIN RECEPTOR-RELATED |
| CAI7993047.1 | NITRIC OXIDE SYNTHASE-RELATED |
| CAI7993043.1 | NITRIC OXIDE SYNTHASE-RELATED |
| CAI7993045.1 | NITRIC OXIDE SYNTHASE-RELATED |
