Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI7993257.1 | METAL TRANSPORTER CNNM |
| CAI7993256.1 | METAL TRANSPORTER CNNM |
| CAI7993259.1 | METAL TRANSPORTER CNNM |
| CAI7993258.1 | METAL TRANSPORTER CNNM |
| CAI7993260.1 | |
| CAI7993262.1 | |
| CAI7993261.1 | |
| CAI7993263.1 | |
| CAI7993266.1 | AAA DOMAIN-CONTAINING |
| CAI7993264.1 | AAA DOMAIN-CONTAINING |
| CAI7993268.1 | AAA DOMAIN-CONTAINING |
| CAI7993276.1 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
| CAI7993274.1 | SAM DOMAIN-CONTAINING PROTEIN-RELATED |
| CAI7993272.1 | SAM DOMAIN-CONTAINING PROTEIN-RELATED |
| CAI7993270.1 | |
| CAI7993284.1 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 46 |
| CAI7993282.1 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 46 |
| CAI7993280.1 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 46 |
| CAI7993278.1 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 46 |
| CAI7993286.1 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 46 |
| CAI7993288.1 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 46 |
| CAI7993292.1 | |
| CAI7993290.1 | |
| CAI7993294.1 | |
| CAI7993300.1 | RHO GTPASE ACTIVATING PROTEIN 18,19-RELATED |
| CAI7993298.1 | RHO GTPASE ACTIVATING PROTEIN 18,19-RELATED |
| CAI7993296.1 | RHO GTPASE ACTIVATING PROTEIN 18,19-RELATED |
| CAI7993302.1 | |
| CAI7993304.1 | |
| CAI7993310.1 | EXOCYST COMPLEX COMPONENT SEC5 |
| CAI7993312.1 | EXOCYST COMPLEX COMPONENT SEC5 |
| CAI7993308.1 | EXOCYST COMPLEX COMPONENT SEC5 |
| CAI7993314.1 | EXOCYST COMPLEX COMPONENT SEC5 |
| CAI7993322.1 | EXOCYST COMPLEX COMPONENT SEC5 |
| CAI7993324.1 | EXOCYST COMPLEX COMPONENT SEC5 |
| CAI7993320.1 | EXOCYST COMPLEX COMPONENT SEC5 |
| CAI7993316.1 | EXOCYST COMPLEX COMPONENT SEC5 |
| CAI7993318.1 | EXOCYST COMPLEX COMPONENT SEC5 |
| CAI7993326.1 | EXOCYST COMPLEX COMPONENT SEC5 |
| CAI7993330.1 | EXOCYST COMPLEX COMPONENT SEC5 |
| CAI7993328.1 | EXOCYST COMPLEX COMPONENT SEC5 |
| CAI7993332.1 | EXOCYST COMPLEX COMPONENT SEC5 |
| CAI7993306.1 | EXOCYST COMPLEX COMPONENT SEC5 |
| CAI7993340.1 | URACIL-DNA GLYCOSYLASE |
| CAI7993342.1 | URACIL-DNA GLYCOSYLASE |
| CAI7993336.1 | URACIL-DNA GLYCOSYLASE |
| CAI7993338.1 | URACIL-DNA GLYCOSYLASE |
| CAI7993334.1 | URACIL-DNA GLYCOSYLASE |
| CAI7993344.1 | URACIL-DNA GLYCOSYLASE |
| CAI7993350.1 | UNCHARACTERIZED |
