Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI7992529.1 | ACYL CARRIER PROTEIN |
| CAI7992531.1 | MALONYL-COA-ACYL CARRIER PROTEIN TRANSACYLASE, MITOCHONDRIAL |
| CAI7992533.1 | 50S RIBOSOMAL PROTEIN L32 |
| CAI7992535.1 | ACYL-COA DEHYDROGENASE |
| CAI7992537.1 | |
| CAI7992539.1 | |
| CAI7992541.1 | - |
| CAI7992543.1 | ATP-BINDING CASSETTE SUB-FAMILY B |
| CAI7992545.1 | ATP-BINDING CASSETTE SUB-FAMILY B |
| CAI7992547.1 | ACETYLTRANSFERASE |
| CAI7992549.1 | FERREDOXIN--NITRITE REDUCTASE, CHLOROPLASTIC |
| CAI7992559.1 | |
| CAI7992557.1 | |
| CAI7992563.1 | |
| CAI7992561.1 | |
| CAI7992565.1 | IMMUNOGLOBULIN FC RECEPTOR |
| CAI7992567.1 | |
| CAI7992569.1 | |
| CAI7992571.1 | IMMUNOGLOBULIN FC RECEPTOR |
| CAI7992573.1 | |
| CAI7992575.1 | |
| CAI7992577.1 | |
| CAI7992579.1 | |
| CAI7992581.1 | PROTEIN BARK BEETLE |
| CAI7992583.1 | PROTEIN BARK BEETLE |
| CAI7992585.1 | |
| CAI7992587.1 | |
| CAI7992589.1 | |
| CAI7992593.1 | SI:CH211-196P9.1-RELATED |
| CAI7992591.1 | SI:CH211-196P9.1-RELATED |
| CAI7992595.1 | SI:CH211-196P9.1-RELATED |
| CAI7992597.1 | SI:CH211-196P9.1-RELATED |
| CAI7992602.1 | |
| CAI7992600.1 | |
| CAI7992604.1 | |
| CAI7992623.1 | EF-HAND DOMAIN-CONTAINING PROTEIN |
| CAI7992621.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI7992619.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI7992617.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI7992615.1 | EF-HAND DOMAIN-CONTAINING PROTEIN |
| CAI7992613.1 | |
| CAI7992611.1 | |
| CAI7992609.1 | |
| CAI7992625.1 | |
| CAI7992632.1 | BONUS, ISOFORM C-RELATED |
| CAI7992634.1 | |
| CAI7992636.1 | |
| CAI7992644.1 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
| CAI7992646.1 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
| CAI7992642.1 | HISTIDYL-TRNA SYNTHETASE |
