Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI7992174.1 | |
| CAI7992172.1 | |
| CAI7992178.1 | |
| CAI7992180.1 | |
| CAI7992176.1 | |
| CAI7992184.1 | |
| CAI7992182.1 | |
| CAI7992186.1 | |
| CAI7992188.1 | |
| CAI7992190.1 | |
| CAI7992192.1 | |
| CAI7992194.1 | GLYCOGEN SYNTHASE KINASE-3 ALPHA |
| CAI7992196.1 | GLYCOGEN SYNTHASE KINASE-3 ALPHA |
| CAI7992208.1 | |
| CAI7992212.1 | SUPPRESSOR OF TY 5 |
| CAI7992210.1 | SUPPRESSOR OF TY 5 |
| CAI7992216.1 | SUPPRESSOR OF TY 5 |
| CAI7992214.1 | SUPPRESSOR OF TY 5 |
| CAI7992222.1 | UNCHARACTERIZED |
| CAI7992220.1 | UNCHARACTERIZED |
| CAI7992218.1 | UNCHARACTERIZED |
| CAI7992228.1 | SPLICING FACTOR 3A SUBUNIT 2 |
| CAI7992226.1 | ADP RIBOSYLATION FACTOR-RELATED |
| CAI7992224.1 | ADP RIBOSYLATION FACTOR-RELATED |
| CAI7992230.1 | SPLICING FACTOR 3A SUBUNIT 2 |
| CAI7992232.1 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 |
| CAI7992234.1 | |
| CAI7992240.1 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 |
| CAI7992238.1 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 |
| CAI7992236.1 | |
| CAI7992242.1 | |
| CAI7992247.1 | CYSTEINE DESULFURYLASE FAMILY MEMBER |
| CAI7992249.1 | |
| CAI7992251.1 | |
| CAI7992253.1 | |
| CAI7992259.1 | SERINE-THREONINE PROTEIN KINASE |
| CAI7992257.1 | SERINE-THREONINE PROTEIN KINASE |
| CAI7992255.1 | SERINE-THREONINE PROTEIN KINASE |
| CAI7992261.1 | SOWAH (DROSOPHILA) HOMOLOG |
| CAI7992263.1 | SOWAH (DROSOPHILA) HOMOLOG |
| CAI7992284.1 | |
| CAI7992282.1 | |
| CAI7992286.1 | GROWTH FACTOR RECEPTOR-BOUND PROTEIN |
| CAI7992290.1 | LANC-LIKE PROTEIN |
| CAI7992292.1 | LANC-LIKE PROTEIN |
| CAI7992288.1 | LANC-LIKE PROTEIN |
| CAI7992301.1 | CITRATE SYNTHASE |
| CAI7992299.1 | CITRATE SYNTHASE |
| CAI7992294.1 | CITRATE SYNTHASE |
| CAI7992297.1 | UNCHARACTERIZED |
