Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI7993722.1 | |
| CAI7993728.1 | ATP-CITRATE SYNTHASE |
| CAI7993726.1 | ATP-CITRATE SYNTHASE |
| CAI7993724.1 | ATP-CITRATE SYNTHASE |
| CAI7993732.1 | ELL-ASSOCIATED FACTOR EAF |
| CAI7993730.1 | ELL-ASSOCIATED FACTOR EAF |
| CAI7993734.1 | |
| CAI7993736.1 | CALPAIN, SMALL SUBUNIT 1 A-RELATED |
| CAI7993742.1 | WD40 REPEAT PROTEIN 12, 37 |
| CAI7993740.1 | WD40 REPEAT PROTEIN 12, 37 |
| CAI7993738.1 | WD40 REPEAT PROTEIN 12, 37 |
| CAI7993744.1 | WD40 REPEAT PROTEIN 12, 37 |
| CAI7993746.1 | |
| CAI7993748.1 | LIN-9 |
| CAI7993750.1 | |
| CAI7993752.1 | |
| CAI7993762.1 | |
| CAI7993760.1 | |
| CAI7993758.1 | |
| CAI7993756.1 | |
| CAI7993754.1 | |
| CAI7993764.1 | |
| CAI7993766.1 | |
| CAI7993768.1 | |
| CAI7993770.1 | |
| CAI7993774.1 | |
| CAI7993776.1 | |
| CAI7993782.1 | CEREBRAL CAVERNOUS MALFORMATIONS PROTEIN 2 HOMOLOG |
| CAI7993780.1 | CEREBRAL CAVERNOUS MALFORMATIONS PROTEIN 2 HOMOLOG |
| CAI7993778.1 | CEREBRAL CAVERNOUS MALFORMATIONS PROTEIN 2 HOMOLOG |
| CAI7993786.1 | CEREBRAL CAVERNOUS MALFORMATIONS PROTEIN 2 HOMOLOG |
| CAI7993784.1 | CEREBRAL CAVERNOUS MALFORMATIONS PROTEIN 2 HOMOLOG |
| CAI7993788.1 | CEREBRAL CAVERNOUS MALFORMATIONS PROTEIN 2 HOMOLOG |
| CAI7993792.1 | CEREBRAL CAVERNOUS MALFORMATIONS PROTEIN 2 HOMOLOG |
| CAI7993790.1 | CEREBRAL CAVERNOUS MALFORMATIONS PROTEIN 2 HOMOLOG |
| CAI7993794.1 | TRANSMEMBRANE PROTEIN 65 |
| CAI7993796.1 | TRANSMEMBRANE PROTEIN 65 |
| CAI7993798.1 | |
| CAI7993800.1 | UNCHARACTERIZED |
| CAI7993802.1 | |
| CAI7993805.1 | |
| CAI7993807.1 | |
| CAI7993810.1 | ZGC:136858 |
| CAI7993811.1 | ZGC:136858 |
| CAI7993818.1 | PRE-MRNA SPLICING FACTOR |
| CAI7993815.1 | PRE-MRNA SPLICING FACTOR |
| CAI7993812.1 | PRE-MRNA SPLICING FACTOR |
| CAI7993814.1 | |
| CAI7993813.1 | |
| CAI7993819.1 | PRE-MRNA SPLICING FACTOR |
