Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8028773.1 | THIOSULFATE SULFERTANSFERASE |
| CAI8028772.1 | THIOSULFATE SULFERTANSFERASE |
| CAI8028771.1 | THIOSULFATE SULFERTANSFERASE |
| CAI8028774.1 | THIOSULFATE SULFERTANSFERASE |
| CAI8028775.1 | |
| CAI8028776.1 | |
| CAI8028778.1 | GLUTAMINE SYNTHETASE |
| CAI8028777.1 | |
| CAI8028779.1 | GLUTAMINE SYNTHETASE |
| CAI8028782.1 | GLUTAMINE SYNTHETASE |
| CAI8028781.1 | GLUTAMINE SYNTHETASE |
| CAI8028780.1 | GLUTAMINE SYNTHETASE |
| CAI8028783.1 | GLUTAMINE SYNTHETASE |
| CAI8028784.1 | GLUTAMINE SYNTHETASE |
| CAI8028785.1 | |
| CAI8028790.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| CAI8028789.1 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
| CAI8028788.1 | ANKYRIN REPEAT, SAM AND BASIC LEUCINE ZIPPER DOMAIN-CONTAINING PROTEIN 1 |
| CAI8028787.1 | |
| CAI8028786.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| CAI8028792.1 | CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATED |
| CAI8028791.1 | CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATED |
| CAI8028793.1 | ANKYRIN REPEAT CONTAINING |
| CAI8028799.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8028796.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| CAI8028798.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| CAI8028797.1 | SI:CH211-189E2.2 |
| CAI8028795.1 | SI:CH211-189E2.2 |
| CAI8028794.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 31-RELATED |
| CAI8028800.1 | THIOSULFATE SULFERTANSFERASE |
| CAI8028801.1 | |
| CAI8028802.1 | |
| CAI8028803.1 | TRANSCRIPTIONAL REGULATOR, MARR FAMILY |
| CAI8028804.1 | TYPE III PANTOTHENATE KINASE |
| CAI8028805.1 | HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE FAMILY |
| CAI8028806.1 | HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE FAMILY |
| CAI8028807.1 | HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE FAMILY |
| CAI8028808.1 | ALKANESULFONATE MONOOXYGENASE |
| CAI8028809.1 | ABC TRANSPORTER, ATP-BINDING PROTEIN |
| CAI8028810.1 | LUCIFERASE-LIKE MONOOXYGENASE |
| CAI8028811.1 | SI:CH211-175M2.5 |
| CAI8028812.1 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
| CAI8028813.1 | |
| CAI8028814.1 | CARBOXYMETHYLENEBUTENOLIDASE-RELATED |
| CAI8028815.1 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
| CAI8028816.1 | STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE |
| CAI8028817.1 | SUGAR KINASE |
| CAI8028818.1 | NUDIX HYDROLASE 23 |
| CAI8028819.1 | |
| CAI8028820.1 | HYDROXYMETHYLGLUTARYL-COA LYASE |
