Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8028369.1 | UNCHARACTERIZED |
| CAI8028368.1 | UNCHARACTERIZED |
| CAI8028373.1 | |
| CAI8028375.1 | TUDOR DOMAIN CONTAINING PROTEIN |
| CAI8028374.1 | RING FINGER PROTEIN 17 |
| CAI8028376.1 | PROTEIN PET100 HOMOLOG, MITOCHONDRIAL |
| CAI8028378.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8028377.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8028379.1 | NUCLEAR AUTOANTIGENIC SPERM PROTEIN NASP -RELATED |
| CAI8028380.1 | |
| CAI8028381.1 | NITRILASE C965.09-RELATED |
| CAI8028382.1 | NITRILASE C965.09-RELATED |
| CAI8028383.1 | TRANSCRIPTION FACTOR BTF3 FAMILY MEMBER |
| CAI8028384.1 | PHOSPHOGLYCERATE MUTASE-RELATED |
| CAI8028385.1 | PHOSPHOGLYCERATE MUTASE-RELATED |
| CAI8028386.1 | U2 SMALL NUCLEAR RIBONUCLEOPROTEIN A |
| CAI8028387.1 | U2 SMALL NUCLEAR RIBONUCLEOPROTEIN A |
| CAI8028388.1 | U2 SMALL NUCLEAR RIBONUCLEOPROTEIN A |
| CAI8028389.1 | |
| CAI8028390.1 | IRON-SULFUR CLUSTER ASSEMBLY PROTEIN |
| CAI8028391.1 | IRON-SULFUR CLUSTER ASSEMBLY PROTEIN |
| CAI8028394.1 | FAM98 |
| CAI8028393.1 | FAM98 |
| CAI8028392.1 | FAM98 |
| CAI8028395.1 | FAM98 |
| CAI8028397.1 | POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1 |
| CAI8028398.1 | POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1 |
| CAI8028396.1 | |
| CAI8028400.1 | ZINC FINGER, ZZ TYPE |
| CAI8028399.1 | ZINC FINGER, ZZ TYPE |
| CAI8028401.1 | ZINC FINGER, ZZ TYPE |
| CAI8028402.1 | CYTOKINE RECEPTOR |
| CAI8028403.1 | CYTOKINE RECEPTOR |
| CAI8028404.1 | SESQUIPEDALIAN |
| CAI8028405.1 | |
| CAI8028413.1 | |
| CAI8028412.1 | |
| CAI8028411.1 | |
| CAI8028409.1 | |
| CAI8028410.1 | |
| CAI8028408.1 | PROTEIN SIDEKICK |
| CAI8028406.1 | PROTEIN SIDEKICK |
| CAI8028407.1 | PROTEIN SIDEKICK |
| CAI8028414.1 | EPH RECEPTOR A5 |
| CAI8028415.1 | |
| CAI8028419.1 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
| CAI8028420.1 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
| CAI8028418.1 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
| CAI8028417.1 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
| CAI8028416.1 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
