About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50%31,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI8028071.1ARYLSULFATASE FAMILY MEMBER
CAI8028070.1ARYLSULFATASE FAMILY MEMBER
CAI8028073.1
CAI8028075.1JAK PATHWAY SIGNAL TRANSDUCTION ADAPTOR MOLECULE
CAI8028074.1
CAI8028076.1JAK PATHWAY SIGNAL TRANSDUCTION ADAPTOR MOLECULE
CAI8028077.1
CAI8028078.1
CAI8028079.1
CAI8028080.1D-AMINOACYL-TRNA DEACYLASE
CAI8028081.1EPOXIDE HYDROLASE
CAI8028082.1
CAI8028083.1
CAI8028084.1D-THREO-ALDOSE 1-DEHYDROGENASE
CAI8028085.1INOSINE-URIDINE PREFERRING NUCLEOSIDE HYDROLASE
CAI8028086.1
CAI8028087.1F420H(2)-DEPENDENT QUINONE REDUCTASE RV1261C
CAI8028088.1LIPOPROTEIN-RELATED
CAI8028089.1LIPOPROTEIN-RELATED
CAI8028090.1THIOSULFATE SULFURTRANSFERASE
CAI8028091.1PQQ ENZYME REPEAT PROTEIN-RELATED
CAI8028092.1
CAI8028093.1FLAVOPROTEIN OXYGENASE
CAI8028094.1
CAI8028095.1SULFOPYRUVATE DECARBOXYLASE SUBUNIT ALPHA
CAI8028096.1SULFOPYRUVATE DECARBOXYLASE SUBUNIT ALPHA
CAI8028097.1
CAI8028098.1CARBOXYMETHYLENEBUTENOLIDASE-RELATED
CAI8028099.1QUORUM-QUENCHING LACTONASE YTNP-RELATED-RELATED
CAI8028101.1ADENINE PHOSPHORIBOSYLTRANSFERASE
CAI8028100.1ADENINE PHOSPHORIBOSYLTRANSFERASE
CAI8028102.1PROTEIN SMF
CAI8028103.1
CAI8028110.1DNA TOPOISOMERASE, TYPE IA, CORE
CAI8028108.1DNA TOPOISOMERASE, TYPE IA, CORE
CAI8028105.1DNA TOPOISOMERASE, TYPE IA, CORE
CAI8028107.1DNA TOPOISOMERASE, TYPE IA, CORE
CAI8028104.1DNA TOPOISOMERASE, TYPE IA, CORE
CAI8028109.1DNA TOPOISOMERASE, TYPE IA, CORE
CAI8028106.1DNA TOPOISOMERASE, TYPE IA, CORE
CAI8028111.1DNA TOPOISOMERASE, TYPE IA, CORE
CAI8028112.1PHAGE INTEGRASE-RELATED
CAI8028113.1CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR
CAI8028114.1AMINOPEPTIDASE
CAI8028115.1EXODEOXYRIBONUCLEASE 7 LARGE SUBUNIT
CAI8028116.1EXODEOXYRIBONUCLEASE 7 LARGE SUBUNIT
CAI8028117.1EXODEOXYRIBONUCLEASE 7 LARGE SUBUNIT
CAI8028118.1EXODEOXYRIBONUCLEASE 7 LARGE SUBUNIT
CAI8028119.1EXODEOXYRIBONUCLEASE 7 LARGE SUBUNIT
CAI8028120.1EXODEOXYRIBONUCLEASE 7 SMALL SUBUNIT
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