Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8027871.1 | CALCIUM-INDEPENDENT PHOSPHOLIPASE A2 IPLA2 -RELATED |
| CAI8027872.1 | ALPHA-1,2-GLUCOSYLTRANSFERASE ALG10 |
| CAI8027873.1 | |
| CAI8027876.1 | MALE STERILITY PROTEIN 2-RELATED |
| CAI8027875.1 | MALE STERILITY PROTEIN 2-RELATED |
| CAI8027874.1 | MALE STERILITY PROTEIN 2-RELATED |
| CAI8027877.1 | MALE STERILITY PROTEIN 2-RELATED |
| CAI8027878.1 | SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER |
| CAI8027879.1 | |
| CAI8027880.1 | |
| CAI8027881.1 | GPI-ANCHORED PROTEIN P137 |
| CAI8027882.1 | SUPPRESSOR OF VARIEGATION 4-20-RELATED |
| CAI8027883.1 | GRIP AND COILED-COIL DOMAIN-CONTAINING PROTEIN 1 |
| CAI8027884.1 | 5-OXOPROLINASE RELATED |
| CAI8027885.1 | ABC TRANSPORTER, ATP-BINDING PROTEIN |
| CAI8027886.1 | P450, PUTATIVE (EUROFUNG)-RELATED |
| CAI8027887.1 | |
| CAI8027888.1 | P450, PUTATIVE (EUROFUNG)-RELATED |
| CAI8027889.1 | ANTITOXIN DINJ-RELATED |
| CAI8027890.1 | ABC TRANSPORTER ATP-BINDING SUBUNIT |
| CAI8027891.1 | |
| CAI8027892.1 | HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN |
| CAI8027893.1 | GLYOXALASE FAMILY PROTEIN |
| CAI8027894.1 | NEPHRIN |
| CAI8027895.1 | NEPHRIN |
| CAI8027896.1 | ADHESION G-PROTEIN COUPLED RECEPTOR V1 |
| CAI8027897.1 | SODIUM/DICARBOXYLATE SYMPORTER-RELATED |
| CAI8027899.1 | SODIUM/DICARBOXYLATE SYMPORTER-RELATED |
| CAI8027898.1 | SODIUM/DICARBOXYLATE SYMPORTER-RELATED |
| CAI8027900.1 | FAS-ASSOCIATED PROTEIN |
| CAI8027901.1 | DUF614 FAMILY PROTEIN-RELATED |
| CAI8027902.1 | DUF614 FAMILY PROTEIN-RELATED |
| CAI8027903.1 | DEPHOSPHO-COA KINASE-RELATED |
| CAI8027904.1 | DEPHOSPHO-COA KINASE-RELATED |
| CAI8027905.1 | |
| CAI8027906.1 | ADIPOR/PROGESTIN RECEPTOR-RELATED |
| CAI8027907.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| CAI8027908.1 | |
| CAI8027910.1 | |
| CAI8027909.1 | |
| CAI8027912.1 | CONTACTIN 5 |
| CAI8027911.1 | CONTACTIN 5 |
| CAI8027913.1 | |
| CAI8027918.1 | G PROTEIN-COUPLED RECEPTOR 157-RELATED |
| CAI8027919.1 | G PROTEIN-COUPLED RECEPTOR 157-RELATED |
| CAI8027917.1 | G PROTEIN-COUPLED RECEPTOR 157-RELATED |
| CAI8027916.1 | G PROTEIN-COUPLED RECEPTOR 157-RELATED |
| CAI8027914.1 | |
| CAI8027915.1 | |
| CAI8027920.1 |
