About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50%31,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI8027671.1HSC70CB, ISOFORM G-RELATED
CAI8027673.1NUCLEOSIDE DIPHOSPHATE KINASE 7
CAI8027672.1NUCLEOSIDE DIPHOSPHATE KINASE 7
CAI8027674.1NUCLEOSIDE DIPHOSPHATE KINASE 7
CAI8027678.1TYROSINE-PROTEIN KINASE RECEPTOR
CAI8027677.1TYROSINE-PROTEIN KINASE RECEPTOR
CAI8027676.1
CAI8027675.1
CAI8027679.1TYROSINE-PROTEIN KINASE RECEPTOR
CAI8027680.1CATION CHANNEL SPERM-ASSOCIATED PROTEIN 3
CAI8027681.1FI24210P1
CAI8027685.1NF-KAPPA-B INHIBITOR ALPHA
CAI8027684.1NF-KAPPA-B INHIBITOR ALPHA
CAI8027683.1NF-KAPPA-B INHIBITOR ALPHA
CAI8027682.1
CAI8027686.1NF-KAPPA-B INHIBITOR ALPHA
CAI8027687.1NF-KAPPA-B INHIBITOR ALPHA
CAI8027688.1NF-KAPPA-B INHIBITOR ALPHA
CAI8027689.1NF-KAPPA-B INHIBITOR ALPHA
CAI8027691.1SELENOPROTEIN S
CAI8027690.1
CAI8027692.1
CAI8027697.1BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED
CAI8027694.1ASPARTYL PROTEASE-RELATED
CAI8027695.1ASPARTYL PROTEASE-RELATED
CAI8027696.1BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED
CAI8027693.1
CAI8027698.1
CAI8027699.1GLUTATHIONE REDUCTASE
CAI8027700.1HMG-BOX TRANSCRIPTION FACTOR BBX
CAI8027701.1HMG-BOX TRANSCRIPTION FACTOR BBX
CAI8027702.1HMG-BOX TRANSCRIPTION FACTOR BBX
CAI8027703.1GAMMA-SECRETASE-ACTIVATING PROTEIN
CAI8027704.1GAMMA-SECRETASE-ACTIVATING PROTEIN
CAI8027705.1MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B
CAI8027706.1MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B
CAI8027707.1MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B
CAI8027708.1MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B
CAI8027714.1RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 2, ISOFORM D
CAI8027712.1RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 2, ISOFORM D
CAI8027711.1RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 2, ISOFORM D
CAI8027710.1RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 2, ISOFORM D
CAI8027709.1RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 2, ISOFORM D
CAI8027715.1RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 2, ISOFORM D
CAI8027718.1RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 2, ISOFORM D
CAI8027717.1RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 2, ISOFORM D
CAI8027716.1RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 2, ISOFORM D
CAI8027720.1RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 2, ISOFORM D
CAI8027719.1RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 2, ISOFORM D
CAI8027713.1RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 2, ISOFORM D
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