About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50%31,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

<< First 602 603 604 605 606 607 608 609 610 611 Forward> Last>>        1226 pages in total

Gene IDDescription
CAI8027721.1RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 2, ISOFORM D
CAI8027722.1RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 2, ISOFORM D
CAI8027723.1RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 2, ISOFORM D
CAI8027724.1COLLAGEN ALPHA
CAI8027725.1COLLAGEN ALPHA
CAI8027726.1
CAI8027727.1
CAI8027729.1COLLAGEN ALPHA
CAI8027728.1COLLAGEN ALPHA
CAI8027730.1CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE
CAI8027735.1UNCHARACTERIZED
CAI8027733.1UNCHARACTERIZED
CAI8027736.1UNCHARACTERIZED
CAI8027734.1UNCHARACTERIZED
CAI8027731.1UNCHARACTERIZED
CAI8027732.1UNCHARACTERIZED
CAI8027737.1
CAI8027738.1UNCHARACTERIZED
CAI8027739.1UNCHARACTERIZED
CAI8027740.1UNCHARACTERIZED
CAI8027742.1BETA-AMYLOID BINDING PROTEIN-RELATED
CAI8027741.1
CAI8027746.1PROTEIN CLT2, CHLOROPLASTIC
CAI8027748.1PROTEIN CLT2, CHLOROPLASTIC
CAI8027749.1PROTEIN CLT2, CHLOROPLASTIC
CAI8027750.1PROTEIN CLT2, CHLOROPLASTIC
CAI8027745.1PROTEIN CLT2, CHLOROPLASTIC
CAI8027747.1PROTEIN CLT2, CHLOROPLASTIC
CAI8027744.1PROTEIN CLT2, CHLOROPLASTIC
CAI8027743.1
CAI8027751.1PROTEIN CLT2, CHLOROPLASTIC
CAI8027752.1PROTEIN CLT2, CHLOROPLASTIC
CAI8027754.1PROTEIN CLT2, CHLOROPLASTIC
CAI8027753.1
CAI8027755.1PROTEIN CLT2, CHLOROPLASTIC
CAI8027756.1
CAI8027757.1COILED-COIL DOMAIN-CONTAINING PROTEIN 84
CAI8027758.1
CAI8027759.1
CAI8027760.1NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED
CAI8027762.1TRANSMEMBRANE PROTEIN 136
CAI8027761.1TRANSMEMBRANE PROTEIN 136
CAI8027763.1E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED
CAI8027767.1TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED
CAI8027766.1
CAI8027764.1TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED
CAI8027765.1TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED
CAI8027768.1
CAI8027769.1
CAI8027779.1SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED
TOP