Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8027575.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8027574.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8027576.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8027573.1 | |
| CAI8027572.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8027577.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8027579.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8027578.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8027571.1 | |
| CAI8027580.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8027581.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8027582.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8027583.1 | N6-ADENOSINE-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT |
| CAI8027584.1 | RNA HELICASE |
| CAI8027585.1 | |
| CAI8027586.1 | |
| CAI8027587.1 | |
| CAI8027588.1 | |
| CAI8027591.1 | STRAWBERRY NOTCH-RELATED |
| CAI8027592.1 | STRAWBERRY NOTCH-RELATED |
| CAI8027590.1 | STRAWBERRY NOTCH-RELATED |
| CAI8027589.1 | STRAWBERRY NOTCH-RELATED |
| CAI8027594.1 | STRAWBERRY NOTCH-RELATED |
| CAI8027593.1 | STRAWBERRY NOTCH-RELATED |
| CAI8027595.1 | STRAWBERRY NOTCH-RELATED |
| CAI8027596.1 | STRAWBERRY NOTCH-RELATED |
| CAI8027597.1 | STRAWBERRY NOTCH-RELATED |
| CAI8027598.1 | |
| CAI8027599.1 | PELOTA |
| CAI8027601.1 | NUDIX HYDROLASE RELATED |
| CAI8027600.1 | NUDIX HYDROLASE RELATED |
| CAI8027602.1 | NUDIX HYDROLASE RELATED |
| CAI8027603.1 | NUDIX HYDROLASE RELATED |
| CAI8027604.1 | RRNA METHYLTRANSFERASE 1, MITOCHONDRIAL |
| CAI8027605.1 | RRNA METHYLTRANSFERASE 1, MITOCHONDRIAL |
| CAI8027606.1 | RRNA METHYLTRANSFERASE 1, MITOCHONDRIAL |
| CAI8027607.1 | PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER |
| CAI8027610.1 | |
| CAI8027611.1 | |
| CAI8027612.1 | |
| CAI8027609.1 | |
| CAI8027608.1 | |
| CAI8027613.1 | ACYLPYRUVASE |
| CAI8027614.1 | XYLOGLUCANASE (EUROFUNG) |
| CAI8027615.1 | LOW CALCIUM RESPONSE LOCUS PROTEIN T |
| CAI8027616.1 | BLR5614 PROTEIN-RELATED |
| CAI8027617.1 | 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE |
| CAI8027618.1 | |
| CAI8027619.1 | |
| CAI8027622.1 | VACUOLAR ATP SYNTHASE SUBUNIT S1 |
