Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8027777.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8027778.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8027776.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8027775.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8027774.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8027773.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8027772.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8027771.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8027770.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8027780.1 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
| CAI8027781.1 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
| CAI8027782.1 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
| CAI8027784.1 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
| CAI8027783.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8027787.1 | 2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA |
| CAI8027786.1 | 2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA |
| CAI8027785.1 | |
| CAI8027788.1 | 2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA |
| CAI8027789.1 | |
| CAI8027790.1 | |
| CAI8027791.1 | |
| CAI8027792.1 | |
| CAI8027793.1 | |
| CAI8027794.1 | |
| CAI8027795.1 | |
| CAI8027797.1 | O-GLCNACASE |
| CAI8027796.1 | O-GLCNACASE |
| CAI8027798.1 | O-GLCNACASE |
| CAI8027799.1 | |
| CAI8027800.1 | |
| CAI8027801.1 | |
| CAI8027802.1 | 60S RIBOSOMAL PROTEIN L22 |
| CAI8027804.1 | |
| CAI8027803.1 | |
| CAI8027805.1 | |
| CAI8027806.1 | UNCHARACTERIZED |
| CAI8027808.1 | |
| CAI8027807.1 | |
| CAI8027811.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8027810.1 | CYTOKINE RECEPTOR |
| CAI8027812.1 | CYTOKINE RECEPTOR |
| CAI8027809.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8027813.1 | GLYCOSYLTRANSFERASE-RELATED |
| CAI8027814.1 | GLYCOSYLTRANSFERASE-RELATED |
| CAI8027815.1 | |
| CAI8027816.1 | |
| CAI8027817.1 | |
| CAI8027818.1 | TARGET OF RAPAMYCIN COMPLEX 2 SUBUNIT MAPKAP1 |
| CAI8027820.1 | MACROGLOBULIN / COMPLEMENT |
| CAI8027819.1 | MACROGLOBULIN / COMPLEMENT |
