Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8027821.1 | MACROGLOBULIN / COMPLEMENT |
| CAI8027822.1 | |
| CAI8027823.1 | |
| CAI8027824.1 | |
| CAI8027825.1 | RECEPTOR-LIKE PROTEIN 55 |
| CAI8027826.1 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| CAI8027827.1 | |
| CAI8027828.1 | DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2 |
| CAI8027830.1 | DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2 |
| CAI8027829.1 | DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2 |
| CAI8027831.1 | D-AMINOPEPTIDASE |
| CAI8027832.1 | |
| CAI8027833.1 | CARTILAGE ACIDIC PROTEIN 1 |
| CAI8027834.1 | CARTILAGE ACIDIC PROTEIN 1 |
| CAI8027835.1 | |
| CAI8027836.1 | THIOREDOXIN REDUCTASE 1-RELATED-RELATED |
| CAI8027837.1 | MOXR FAMILY PROTEIN |
| CAI8027838.1 | SERINE PROTEASE FAMILY S1C HTRA-RELATED |
| CAI8027840.1 | RHO FAMILY GTPASE |
| CAI8027839.1 | RHO FAMILY GTPASE |
| CAI8027843.1 | LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED |
| CAI8027842.1 | |
| CAI8027841.1 | |
| CAI8027845.1 | |
| CAI8027844.1 | RHO FAMILY GTPASE |
| CAI8027846.1 | |
| CAI8027847.1 | |
| CAI8027848.1 | |
| CAI8027849.1 | |
| CAI8027850.1 | |
| CAI8027852.1 | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED |
| CAI8027851.1 | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED |
| CAI8027853.1 | MUCIN 4-RELATED |
| CAI8027854.1 | MICROTUBULE ASSOCIATED PROTEIN XMAP215 |
| CAI8027858.1 | SCY1-RELATED S/T PROTEIN KINASE-LIKE |
| CAI8027859.1 | SCY1-RELATED S/T PROTEIN KINASE-LIKE |
| CAI8027860.1 | SCY1-RELATED S/T PROTEIN KINASE-LIKE |
| CAI8027855.1 | SCY1-RELATED S/T PROTEIN KINASE-LIKE |
| CAI8027861.1 | SCY1-RELATED S/T PROTEIN KINASE-LIKE |
| CAI8027862.1 | SCY1-RELATED S/T PROTEIN KINASE-LIKE |
| CAI8027857.1 | SCY1-RELATED S/T PROTEIN KINASE-LIKE |
| CAI8027856.1 | SCY1-RELATED S/T PROTEIN KINASE-LIKE |
| CAI8027863.1 | SCY1-RELATED S/T PROTEIN KINASE-LIKE |
| CAI8027864.1 | SCY1-RELATED S/T PROTEIN KINASE-LIKE |
| CAI8027865.1 | |
| CAI8027866.1 | FYVE-FINGER-CONTAINING RAB5 EFFECTOR PROTEIN RABENOSYN-5-RELATED |
| CAI8027867.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8027870.1 | CALCIUM-INDEPENDENT PHOSPHOLIPASE A2 IPLA2 -RELATED |
| CAI8027869.1 | CALCIUM-INDEPENDENT PHOSPHOLIPASE A2 IPLA2 -RELATED |
| CAI8027868.1 | CALCIUM-INDEPENDENT PHOSPHOLIPASE A2 IPLA2 -RELATED |
