About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_032954-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_032955-T1
OS493_032956-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_032958-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_032959-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_032960-T1GUANYLATE BINDING PROTEIN
OS493_032961-T1GUANYLATE BINDING PROTEIN
OS493_032962-T1GUANYLATE BINDING PROTEIN
OS493_032963-T1NXPE FAMILY MEMBER
OS493_032965-T1CWF19, CELL CYCLE CONTROL PROTEIN
OS493_032966-T140S RIBOSOMAL PROTEIN S11 FAMILY MEMBER
OS493_032967-T1ATP-BINDING CASSETTE SUB-FAMILY C
OS493_032968-T1URACIL-DNA GLYCOSYLASE
OS493_032969-T1URACIL-DNA GLYCOSYLASE
OS493_032970-T1MAP KINASE KINASE KINASE SSK2-RELATED-RELATED
OS493_032971-T1WD40 REPEAT PROTEIN
OS493_032972-T1CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
OS493_032973-T1
OS493_032974-T1CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
OS493_032975-T1CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
OS493_032976-T1CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
OS493_032977-T1CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
OS493_032978-T1
OS493_032979-T1
OS493_032980-T1
OS493_032981-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_032982-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_032983-T1LATROPHILIN RECEPTOR-LIKE PROTEIN A
OS493_032984-T1
OS493_032985-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_032986-T1TYROSINE-PROTEIN KINASE RECEPTOR
OS493_032987-T1LATROPHILIN RECEPTOR-LIKE PROTEIN A
OS493_032988-T1NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER
OS493_032989-T1
OS493_032990-T1
OS493_032991-T1
OS493_032992-T1
OS493_032993-T1
OS493_032994-T1
OS493_032995-T1
OS493_032996-T1
OS493_032997-T1
OS493_032998-T1CENTROSOMAL PROTEIN-RELATED
OS493_032999-T15-HYDROXYTRYPTAMINE RECEPTOR
OS493_033000-T1
OS493_033001-T1
OS493_033002-T1RIBONUCLEASE
OS493_033003-T1
OS493_033004-T1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_033005-T1RIBONUCLEASE
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