About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_032690-T1CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 65
OS493_032691-T1TRANSAMINASE
OS493_032692-T1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
OS493_032693-T1
OS493_032694-T1
OS493_032695-T1
OS493_032696-T1EGF-LIKE-DOMAIN, MULTIPLE 7, 8
OS493_032697-T1CRUMBS FAMILY MEMBER
OS493_032698-T1EGF-LIKE DOMAIN-CONTAINING PROTEIN
OS493_032699-T1CRUMBS FAMILY MEMBER
OS493_032700-T1EGF-LIKE-DOMAIN, MULTIPLE 7, 8
OS493_032701-T1TRYPTASE-RELATED
OS493_032702-T1TUBULIN
OS493_032703-T1TUBULIN
OS493_032704-T1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_032705-T1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
OS493_032706-T1HOMEOBOX PROTEIN ARISTALESS
OS493_032707-T1MONOCARBOXYLATE TRANSPORTER
OS493_032708-T1ZINC FINGER PROTEIN 106
OS493_032709-T1MONOCARBOXYLATE TRANSPORTER
OS493_032710-T1
OS493_032711-T1ZINC FINGER PROTEIN 106
OS493_032712-T1
OS493_032713-T1
OS493_032714-T1
OS493_032715-T1
OS493_032716-T1ZINC FINGER PROTEIN 106
OS493_032717-T1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
OS493_032718-T1WNT RELATED
OS493_032719-T1WNT RELATED
OS493_032720-T1WNT RELATED
OS493_032721-T1
OS493_032722-T1
OS493_032723-T1
OS493_032724-T1
OS493_032725-T1
OS493_032726-T1
OS493_032727-T1RAP GTPASE-ACTIVATING PROTEIN
OS493_032728-T1RAP GTPASE-ACTIVATING PROTEIN
OS493_032729-T1UNCHARACTERIZED
OS493_032730-T1
OS493_032731-T1OPSIN
OS493_032732-T1OPSIN
OS493_032733-T1G PROTEIN-COUPLED RECEPTOR
OS493_032734-T1ZINC FINGER PROTEIN 330
OS493_032735-T1
OS493_032736-T1
OS493_032737-T1
OS493_032738-T1
OS493_032739-T1UNCHARACTERIZED
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