About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_032587-T1
OS493_032588-T1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
OS493_032589-T1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
OS493_032590-T1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
OS493_032591-T1
OS493_032592-T1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
OS493_032593-T1CELL DIVISION PROTEIN KINASE
OS493_032594-T1AMINO ACID TRANSPORTER
OS493_032595-T1
OS493_032596-T1
OS493_032597-T1AMINOMETHYLTRANSFERASE
OS493_032598-T1AMINOMETHYLTRANSFERASE
OS493_032599-T1
OS493_032600-T1
OS493_032601-T1
OS493_032602-T1
OS493_032603-T1DYNAMIN
OS493_032604-T1DYNAMIN
OS493_032605-T1DYNAMIN
OS493_032606-T1
OS493_032607-T1G-PROTEIN COUPLED RECEPTOR
OS493_032608-T1FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
OS493_032609-T1-
OS493_032610-T1
OS493_032611-T1LATROPHILIN RECEPTOR-LIKE PROTEIN A
OS493_032612-T1
OS493_032613-T1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
OS493_032614-T1
OS493_032615-T1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
OS493_032616-T1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
OS493_032617-T1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
OS493_032618-T1
OS493_032619-T1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
OS493_032620-T1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
OS493_032621-T1
OS493_032622-T1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
OS493_032623-T1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
OS493_032624-T1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
OS493_032625-T1
OS493_032626-T1
OS493_032627-T1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
OS493_032629-T1
OS493_032630-T1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
OS493_032631-T1
OS493_032632-T1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
OS493_032633-T1
OS493_032634-T1
OS493_032635-T1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
OS493_032636-T1ALPHA KINASE/ELONGATION FACTOR 2 KINASE
OS493_032637-T1
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