About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_032638-T1
OS493_032639-T1GLUTATHIONE SYNTHETASE
OS493_032640-T1GLUTATHIONE SYNTHETASE
OS493_032641-T1GLUTATHIONE SYNTHETASE
OS493_032642-T1SOMETHING ABOUT SILENCING PROTEIN 10-RELATED
OS493_032643-T1
OS493_032644-T1
OS493_032645-T1
OS493_032646-T1
OS493_032648-T1
OS493_032649-T1
OS493_032650-T1
OS493_032651-T1
OS493_032652-T1
OS493_032653-T1-
OS493_032654-T1-
OS493_032655-T1
OS493_032656-T1
OS493_032657-T1CYSTEINE PROTEASE FAMILY C1-RELATED
OS493_032658-T1CYSTEINE PROTEASE FAMILY C1-RELATED
OS493_032659-T1TRYPTOPHAN 2,3-DIOXYGENASE
OS493_032660-T1OPSIN
OS493_032661-T1OPSIN
OS493_032662-T1
OS493_032663-T1
OS493_032664-T1
OS493_032665-T1
OS493_032666-T1
OS493_032667-T1
OS493_032668-T1BOMB/KIRA PROTEINS
OS493_032669-T1MYOSIN REGULATORY LIGHT CHAIN 2
OS493_032671-T1
OS493_032672-T1
OS493_032673-T1
OS493_032674-T1
OS493_032675-T1
OS493_032676-T1TENSIN
OS493_032677-T1CYSTEINE PROTEASE FAMILY C1-RELATED
OS493_032678-T1CYSTEINE PROTEASE FAMILY C1-RELATED
OS493_032679-T1TENSIN
OS493_032680-T1
OS493_032681-T1
OS493_032682-T1TENSIN
OS493_032683-T1EG:EG0003.4 PROTEIN-RELATED
OS493_032684-T1EG:EG0003.4 PROTEIN-RELATED
OS493_032685-T1
OS493_032686-T1WNT RELATED
OS493_032687-T1WNT RELATED
OS493_032688-T1F-BOX ONLY PROTEIN 48-RELATED
OS493_032689-T1SH2-SH3 ADAPTOR PROTEIN-RELATED
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