About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_032793-T1
OS493_032794-T1
OS493_032796-T1
OS493_032797-T1GLUTAREDOXIN FAMILY MEMBER
OS493_032798-T1GLUTAREDOXIN FAMILY MEMBER
OS493_032799-T1ADHESION G-PROTEIN COUPLED RECEPTOR
OS493_032802-T1
OS493_032803-T1RING ZINC FINGER PROTEIN
OS493_032804-T1
OS493_032805-T1
OS493_032806-T1
OS493_032807-T1SH3 MULTIPLE DOMAIN
OS493_032809-T1
OS493_032810-T1
OS493_032811-T1
OS493_032812-T1SH3 MULTIPLE DOMAIN
OS493_032813-T1
OS493_032814-T1
OS493_032815-T1PROTEIN-TYROSINE SULFOTRANSFERASE 2
OS493_032816-T1
OS493_032817-T1CHITINASE
OS493_032818-T1
OS493_032819-T1
OS493_032822-T1NACHT DOMAIN-CONTAINING PROTEIN
OS493_032823-T1TRANSMEMBRANE CHANNEL-RELATED
OS493_032824-T1MACROPHAGE ERYTHROBLAST ATTACHER-RELATED
OS493_032826-T1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
OS493_032827-T1
OS493_032828-T1
OS493_032829-T1CXXC-TYPE ZINC FINGER PROTEIN 1
OS493_032830-T1
OS493_032831-T1SENTRIN/SUMO-SPECIFIC PROTEASE
OS493_032832-T1MULTIDRUG RESISTANCE PROTEIN
OS493_032833-T1MULTIDRUG RESISTANCE PROTEIN
OS493_032834-T1MULTIDRUG RESISTANCE PROTEIN
OS493_032835-T1OTU DOMAIN CONTAINING PROTEIN
OS493_032836-T1PIEZO-TYPE MECHANOSENSITIVE ION CHANNEL HOMOLOG
OS493_032837-T1PIEZO-TYPE MECHANOSENSITIVE ION CHANNEL HOMOLOG
OS493_032838-T1PIKACHURIN-LIKE PROTEIN
OS493_032839-T1
OS493_032840-T1
OS493_032841-T1PIKACHURIN-LIKE PROTEIN
OS493_032843-T1CELL FATE DETERMINING PROTEIN MAB21-RELATED
OS493_032844-T1PIKACHURIN-LIKE PROTEIN
OS493_032845-T1GTP-BINDING PROTEIN ALPHA SUBUNIT
OS493_032846-T1ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY DOMAIN-CONTAINING PROTEIN 1
OS493_032847-T1SELECTIN LIGAND RELATED
OS493_032848-T1SELECTIN LIGAND RELATED
OS493_032849-T1SELECTIN LIGAND RELATED
OS493_032850-T1SELECTIN LIGAND RELATED
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