About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_033006-T1RIBONUCLEASE
OS493_033007-T1RIBONUCLEASE
OS493_033010-T1
OS493_033011-T1
OS493_033012-T1
OS493_033013-T1G-PROTEIN COUPLED RECEPTOR
OS493_033016-T1CYTOKINE RECEPTOR
OS493_033017-T1CYTOKINE RECEPTOR
OS493_033018-T1
OS493_033019-T1LITHOSTATHINE
OS493_033020-T1LEUCINE-RICH PPR MOTIF-CONTAINING PROTEIN, MITOCHONDRIAL
OS493_033021-T1
OS493_033022-T1
OS493_033023-T1CYTOKINE RECEPTOR
OS493_033024-T1PROTEIN SIDEKICK
OS493_033025-T1CYTOKINE RECEPTOR
OS493_033026-T1UNCHARACTERIZED
OS493_033027-T1
OS493_033028-T1
OS493_033029-T1
OS493_033030-T1FTP DOMAIN-CONTAINING PROTEIN
OS493_033031-T1COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED
OS493_033032-T1COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED
OS493_033033-T1
OS493_033034-T1MULTICOPPER OXIDASE-RELATED
OS493_033035-T1
OS493_033036-T1
OS493_033037-T1
OS493_033038-T1FTP DOMAIN-CONTAINING PROTEIN
OS493_033039-T1
OS493_033040-T1
OS493_033041-T1
OS493_033042-T1CYTOKINE RECEPTOR
OS493_033043-T1VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL
OS493_033045-T1HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
OS493_033046-T1GLYCOPROTEIN HORMONE RECEPTOR
OS493_033047-T1HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN U FAMILY MEMBER
OS493_033048-T1AP COMPLEX SUBUNIT MU
OS493_033049-T1
OS493_033050-T1
OS493_033051-T1
OS493_033052-T1
OS493_033053-T1ZINC FINGER-CONTAINING PROTEIN P48ZNF
OS493_033054-T1
OS493_033055-T1
OS493_033056-T1GLYCOPROTEIN HORMONE RECEPTOR
OS493_033057-T1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
OS493_033058-T1COP9 SIGNALOSOME COMPLEX SUBUNIT 8
OS493_033059-T1PEROXIREDOXIN
OS493_033060-T1PROTEIN CBG20567
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