About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_033061-T1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
OS493_033062-T1GLYCOPROTEIN HORMONE RECEPTOR
OS493_033063-T1
OS493_033064-T1
OS493_033065-T1
OS493_033066-T1
OS493_033068-T1
OS493_033081-T1EXPRESSED PROTEIN
OS493_033082-T1
OS493_033083-T1
OS493_033087-T1CXC DOMAIN-CONTAINING PROTEIN-RELATED
OS493_033088-T1
OS493_033089-T1
OS493_033092-T1
OS493_033093-T1SET DOMAIN-CONTAINING PROTEIN-RELATED
OS493_033095-T1LITHOSTATHINE
OS493_033096-T1PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
OS493_033097-T1LITHOSTATHINE
OS493_033098-T1LITHOSTATHINE
OS493_033099-T1
OS493_033100-T1CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 8
OS493_033101-T1LITHOSTATHINE
OS493_033102-T1LEUCOKININ RECEPTOR-RELATED
OS493_033103-T1LEUCOKININ RECEPTOR-RELATED
OS493_033104-T1ACYL COENZYME A THIOESTER HYDROLASE
OS493_033105-T1
OS493_033106-T1
OS493_033107-T1
OS493_033108-T1TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)
OS493_033109-T1
OS493_033110-T1TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)
OS493_033111-T1
OS493_033112-T1TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)
OS493_033114-T1
OS493_033115-T1TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)
OS493_033116-T1
OS493_033118-T1
OS493_033119-T1TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)
OS493_033120-T1TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)
OS493_033121-T1
OS493_033122-T1
OS493_033123-T1TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)
OS493_033124-T1FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
OS493_033125-T1
OS493_033126-T1
OS493_033127-T1
OS493_033128-T1
OS493_033129-T1BCL-2 RELATED
OS493_033130-T1
OS493_033131-T1
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