About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_033243-T1G PROTEIN-COUPLED RECEPTOR
OS493_033244-T1G PROTEIN-COUPLED RECEPTOR
OS493_033245-T1B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
OS493_033246-T1
OS493_033247-T1MULTICOPPER OXIDASE-RELATED
OS493_033248-T1
OS493_033249-T1EXPRESSED PROTEIN
OS493_033250-T1PERFORIN-LIKE PROTEIN 1
OS493_033251-T1PERFORIN-LIKE PROTEIN 1
OS493_033252-T1PERFORIN-LIKE PROTEIN 1
OS493_033253-T1E3 UBIQUITIN-PROTEIN LIGASE MIB2
OS493_033254-T1
OS493_033255-T1E3 UBIQUITIN-PROTEIN LIGASE MIB2
OS493_033256-T1E3 UBIQUITIN-PROTEIN LIGASE MIB2
OS493_033257-T1
OS493_033258-T1
OS493_033259-T1PERFORIN-LIKE PROTEIN 1
OS493_033260-T1PERFORIN-LIKE PROTEIN 1
OS493_033261-T1
OS493_033262-T1
OS493_033263-T1INOSITOL 5-PHOSPHATASE
OS493_033264-T1
OS493_033265-T1
OS493_033266-T1CARBOHYDRATE SULFOTRANSFERASE
OS493_033267-T1
OS493_033268-T1OPSIN
OS493_033270-T1
OS493_033271-T1NUCLEAR PORE MEMBRANE GLYCOPROTEIN GP210-RELATED
OS493_033272-T1NUCLEAR PORE MEMBRANE GLYCOPROTEIN GP210-RELATED
OS493_033273-T1NUCLEAR PORE MEMBRANE GLYCOPROTEIN GP210-RELATED
OS493_033274-T1PROTEIN CBG16327
OS493_033275-T1GAMMA-SECRETASE SUBUNIT APH-1
OS493_033276-T1NACHT DOMAIN-CONTAINING PROTEIN
OS493_033277-T1
OS493_033278-T1
OS493_033279-T1
OS493_033281-T1NACHT DOMAIN-CONTAINING PROTEIN
OS493_033282-T1
OS493_033283-T1
OS493_033284-T1NACHT DOMAIN-CONTAINING PROTEIN
OS493_033285-T1
OS493_033286-T1NACHT DOMAIN-CONTAINING PROTEIN
OS493_033287-T1
OS493_033289-T1NACHT DOMAIN-CONTAINING PROTEIN
OS493_033290-T1NACHT DOMAIN-CONTAINING PROTEIN
OS493_033291-T1
OS493_033292-T1NACHT DOMAIN-CONTAINING PROTEIN
OS493_033293-T1
OS493_033294-T1
OS493_033295-T1NACHT DOMAIN-CONTAINING PROTEIN
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