About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 586 587 588 589 590 591 592 593 594 595 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_031936-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 162
OS493_031937-T1
OS493_031938-T1
OS493_031939-T1
OS493_031940-T1
OS493_031941-T1
OS493_031942-T1
OS493_031943-T1
OS493_031944-T1
OS493_031945-T1
OS493_031946-T1
OS493_031947-T1SPARC OSTEONECTIN
OS493_031948-T1
OS493_031949-T1SPARC OSTEONECTIN
OS493_031950-T1
OS493_031951-T1
OS493_031952-T1
OS493_031953-T1
OS493_031954-T1HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
OS493_031955-T1CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 299
OS493_031956-T1
OS493_031957-T1IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED
OS493_031958-T1DOPAMINE BETA HYDROXYLASE RELATED
OS493_031959-T1CYTOCHROME P450 FAMILY 4
OS493_031960-T1CYTOCHROME P450 FAMILY 4
OS493_031961-T1
OS493_031962-T1CYTOCHROME P450 FAMILY 4
OS493_031963-T1
OS493_031964-T1TRANSAMIDASE
OS493_031965-T1
OS493_031966-T1
OS493_031967-T1
OS493_031968-T1
OS493_031969-T1
OS493_031970-T1FOLLISTATIN-RELATED
OS493_031973-T1SPARC OSTEONECTIN
OS493_031974-T1SPARC OSTEONECTIN
OS493_031975-T1FUKUTIN RELATED PROTEIN
OS493_031976-T1
OS493_031977-T1
OS493_031978-T1
OS493_031979-T1
OS493_031980-T1
OS493_031981-T1PROTEIN GAMETE EXPRESSED 1
OS493_031982-T1
OS493_031983-T1E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED
OS493_031984-T1
OS493_031985-T1MAP/MICROTUBULE AFFINITY-REGULATING KINASE
OS493_031986-T1COILED-COIL DOMAIN-CONTAINING PROTEIN 169
OS493_031987-T1
TOP