About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_031761-T1
OS493_031763-T1
OS493_031764-T1
OS493_031765-T1
OS493_031766-T1
OS493_031767-T1
OS493_031768-T1
OS493_031769-T1
OS493_031770-T1DNA HELICASE RECQ FAMILY MEMBER
OS493_031771-T1
OS493_031772-T1SI:CH211-189E2.2
OS493_031773-T1GLYCOSYLTRANSFERASE WBBK-RELATED
OS493_031774-T1
OS493_031775-T1
OS493_031776-T1
OS493_031777-T1
OS493_031779-T1
OS493_031780-T1
OS493_031781-T1
OS493_031782-T1INTERFERON-INDUCED PROTEIN 44
OS493_031783-T1INTERFERON-INDUCED PROTEIN 44
OS493_031785-T1
OS493_031786-T1
OS493_031787-T1
OS493_031788-T1
OS493_031789-T1
OS493_031790-T1
OS493_031791-T1
OS493_031792-T1
OS493_031793-T1SAM DOMAIN-CONTAINING PROTEIN-RELATED
OS493_031794-T1
OS493_031795-T1
OS493_031797-T1SAM DOMAIN-CONTAINING PROTEIN-RELATED
OS493_031798-T1COLLAGEN ALPHA
OS493_031799-T1COLLAGEN ALPHA
OS493_031800-T1COLLAGEN ALPHA
OS493_031801-T1COLLAGEN ALPHA
OS493_031802-T1COLLAGEN ALPHA
OS493_031803-T1
OS493_031804-T1COLLAGEN ALPHA
OS493_031805-T1COLLAGEN ALPHA
OS493_031806-T1
OS493_031807-T1PROPERDIN
OS493_031808-T1COLLAGEN ALPHA
OS493_031809-T1PROPERDIN
OS493_031810-T1PROPERDIN
OS493_031813-T1COLLAGEN ALPHA
OS493_031814-T1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
OS493_031815-T1COLLAGEN ALPHA
OS493_031816-T1COLLAGEN ALPHA
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