About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_031493-T1INTERLEUKIN-17 RECEPTOR
OS493_031494-T1INTERLEUKIN-17 RECEPTOR
OS493_031496-T1GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED
OS493_031497-T1FORMIN-BINDING PROTEIN 4
OS493_031498-T1
OS493_031499-T1
OS493_031500-T1BONUS, ISOFORM C-RELATED
OS493_031501-T1BONUS, ISOFORM C-RELATED
OS493_031502-T1
OS493_031503-T1
OS493_031505-T1
OS493_031506-T1
OS493_031507-T1BC025462 PROTEIN
OS493_031508-T1
OS493_031510-T1
OS493_031512-T1
OS493_031513-T1
OS493_031514-T1BC025462 PROTEIN
OS493_031515-T1BC025462 PROTEIN
OS493_031516-T1PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1
OS493_031519-T1SIMILAR TO HYPOTHETICAL PROTEIN
OS493_031520-T13'-5' EXORIBONUCLEASE CSL4-RELATED
OS493_031521-T1CATION CHANNEL SPERM-ASSOCIATED PROTEIN SUBUNIT BETA
OS493_031522-T1CATION CHANNEL SPERM-ASSOCIATED PROTEIN SUBUNIT BETA
OS493_031523-T1
OS493_031524-T1METALLOPROTEASE INHIBITOR
OS493_031525-T15-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE METHYLTRANSFERASE
OS493_031526-T15-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE METHYLTRANSFERASE
OS493_031527-T1
OS493_031528-T1
OS493_031529-T1MULTICOPPER OXIDASE-RELATED
OS493_031530-T1
OS493_031531-T1
OS493_031532-T1
OS493_031533-T1
OS493_031534-T15-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE METHYLTRANSFERASE
OS493_031535-T1
OS493_031536-T1
OS493_031537-T1UNCHARACTERIZED
OS493_031538-T1UNCHARACTERIZED
OS493_031539-T1ALCOHOL O-ACETYLTRANSFERASE 1-RELATED
OS493_031540-T1
OS493_031541-T1UNCHARACTERIZED
OS493_031542-T1UNCHARACTERIZED
OS493_031543-T1
OS493_031544-T1PROGRAMMED CELL DEATH 4
OS493_031545-T1TRANSMEMBRANE PROTEIN 180
OS493_031546-T1TETRATRICOPEPTIDE REPEAT PROTEIN 14
OS493_031547-T1
OS493_031548-T1
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